RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 TPH2Q8IWU9 490 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 C12orf50Q8NA57 414 aaPredicted RBP20.93■□□□□ 0.94
HMG20B-213ENST00000488973 AGAP1Q9UPQ3 857 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 KLRG2A4D1S0 409 aaPredicted RBP20.93■□□□□ 0.94
HMG20B-213ENST00000488973 TMEM110-MUSTN1A8MSY1 372 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 POLRMTO00411 1230 aaKnown RBP20.93■□□□□ 0.94
HMG20B-213ENST00000488973 UBOX5O94941 541 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 RARAP10276 462 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 PYGMP11217 842 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 HOXA10P31260 410 aaPredicted RBP20.93■□□□□ 0.94
HMG20B-213ENST00000488973 GBP2P32456 591 aaPredicted RBP20.93■□□□□ 0.94
HMG20B-213ENST00000488973 CLNS1AP54105 237 aaKnown RBP20.93■□□□□ 0.94
HMG20B-213ENST00000488973 SLC8A3P57103 927 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 MESDQ14696 234 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 USH1GQ495M9 461 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 RSRC1Q96IZ7 334 aaKnown RBP20.93■□□□□ 0.94
HMG20B-213ENST00000488973 SERPINB12Q96P63 405 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 UBE2TQ9NPD8 197 aaPredicted RBP20.93■□□□□ 0.94
HMG20B-213ENST00000488973 KCND2Q9NZV8 630 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 IGLV3-22A0A075B6J6 115 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 EXOC3O60645 756 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 RBM5P52756 815 aaKnown RBP eCLIP20.92■□□□□ 0.94
HMG20B-213ENST00000488973 NCALDP61601 193 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 SF3A3Q12874 501 aaKnown RBP eCLIP20.92■□□□□ 0.94
HMG20B-213ENST00000488973 CALCOCO2Q13137 446 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 MTA1Q13330 715 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 CERS5Q8N5B7 392 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 DYDC1Q8WWB3 177 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 DYDC2Q96IM9 177 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 COA1Q9GZY4 146 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 DNAJC18Q9H819 358 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 ANKRD63C9JTQ0 380 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 SUN1O94901 812 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 MUTP22033 750 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 ATP5DP30049 168 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 RPS6KA3P51812 740 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 SIX1Q15475 284 aaPredicted RBP20.92■□□□□ 0.94
HMG20B-213ENST00000488973 RPUSD2Q8IZ73 545 aaKnown RBP20.92■□□□□ 0.94
HMG20B-213ENST00000488973 KLHL23Q8NBE8 558 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 MICAL1Q8TDZ2 1067 aa20.92■□□□□ 0.94
HMG20B-213ENST00000488973 FAM170AA1A519 330 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 P4HA2O15460 535 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 GZMAP12544 262 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 CETN1Q12798 172 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 PPP2R5CQ13362 524 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 SLC5A9Q2M3M2 681 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 ACCSLQ4AC99 568 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 CCDC38Q502W7 563 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 SLCO2A1Q92959 643 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 LRRC19Q9H756 370 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 WHRNQ9P202 907 aa20.91■□□□□ 0.94
HMG20B-213ENST00000488973 PIK3CDO00329 1044 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 O00370 1275 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 GCKP35557 465 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 SNAP25P60880 206 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 ODR4Q5SWX8 454 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 HHIPL2Q6UWX4 724 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 MAB21L3Q8N8X9 362 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 ARHGEF2Q92974 986 aaKnown RBP20.9■□□□□ 0.94
HMG20B-213ENST00000488973 STAMBPL1Q96FJ0 436 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 CDC42EP4Q9H3Q1 356 aaKnown RBP20.9■□□□□ 0.94
HMG20B-213ENST00000488973 PTPN22Q9Y2R2 807 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 CD2APQ9Y5K6 639 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 TCRBV7S2A1N4TA0A589 114 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 TCP11X1B4DZS4 312 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 ECEL1O95672 775 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 SLURP2P0DP57 97 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 PECAM1P16284 738 aaPredicted RBP20.9■□□□□ 0.94
HMG20B-213ENST00000488973 BNIP1Q12981 228 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 SYDE2Q5VT97 1194 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 MIGA2Q7L4E1 593 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 AKT1S1Q96B36 256 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 STRA6Q9BX79 667 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 ECT2Q9H8V3 914 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 SMCHD1A6NHR9 2005 aa20.9■□□□□ 0.94
HMG20B-213ENST00000488973 ZNFX1Q9P2E3 1918 aaKnown RBP20.89■□□□□ 0.94
HMG20B-213ENST00000488973 TMEM120BA0PK00 339 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 PSMD10O75832 226 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 HOXA13P31271 388 aaPredicted RBP20.89■□□□□ 0.94
HMG20B-213ENST00000488973 LONRF1Q17RB8 773 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 CERKLQ49MI3 558 aaPredicted RBP20.89■□□□□ 0.94
HMG20B-213ENST00000488973 INTS8Q75QN2 995 aaKnown RBP20.89■□□□□ 0.94
HMG20B-213ENST00000488973 CCDC25Q86WR0 208 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 SIAH1Q8IUQ4 282 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 ARHGEF19Q8IW93 802 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 GMCL1P1Q8NEA9 526 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 GMCL1Q96IK5 515 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 L3MBTL3Q96JM7 780 aaPredicted RBP20.89■□□□□ 0.94
HMG20B-213ENST00000488973 NACC1Q96RE7 527 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 CRAMP1Q96RY5 1269 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 FGFR1OP2Q9NVK5 253 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 C15orf41Q9Y2V0 281 aa20.89■□□□□ 0.94
HMG20B-213ENST00000488973 EMSYQ7Z589 1322 aa20.89■□□□□ 0.93
HMG20B-213ENST00000488973 F5H6K3 240 aa20.89■□□□□ 0.93
HMG20B-213ENST00000488973 ZBTB39O15060 712 aa20.89■□□□□ 0.93
HMG20B-213ENST00000488973 RPSAP08865 295 aaKnown RBP20.89■□□□□ 0.93
HMG20B-213ENST00000488973 COPS2P61201 443 aa20.89■□□□□ 0.93
HMG20B-213ENST00000488973 KCNJ2P63252 427 aa20.89■□□□□ 0.93
HMG20B-213ENST00000488973 NFIAQ12857 509 aa20.89■□□□□ 0.93
HMG20B-213ENST00000488973 APOBEC3HQ6NTF7 200 aaKnown RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms