RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 FOSP01100 380 aaPredicted RBP4.23□□□□□ -1.73
CCDC93-209ENST00000488908 CLEC2LP0C7M8 214 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 FDXRP22570 491 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 FLT3P36888 993 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 GPR15P49685 360 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 NRG3P56975 720 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 CCDC178Q5BJE1 867 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 FAM102AQ5T9C2 384 aaPredicted RBP4.23□□□□□ -1.73
CCDC93-209ENST00000488908 UBE2R2Q712K3 238 aaPredicted RBP4.23□□□□□ -1.73
CCDC93-209ENST00000488908 ANKS1AQ92625 1134 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 TFAP2CQ92754 450 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 FERMT2Q96AC1 680 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 SLC29A3Q9BZD2 475 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 USP18Q9UMW8 372 aa4.23□□□□□ -1.73
CCDC93-209ENST00000488908 SETD1BQ9UPS6 1966 aaKnown RBP4.22□□□□□ -1.73
CCDC93-209ENST00000488908 DNAJC9-AS1A6NH13 148 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 TBKBP1A7MCY6 615 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 ELL2O00472 640 aaPredicted RBP4.22□□□□□ -1.73
CCDC93-209ENST00000488908 MATN4O95460 622 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 ABCG1P45844 678 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 SIM1P81133 766 aaPredicted RBP4.22□□□□□ -1.73
CCDC93-209ENST00000488908 ZNF460Q14592 562 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 ZNF169Q14929 603 aaPredicted RBP4.22□□□□□ -1.73
CCDC93-209ENST00000488908 FNDC3BQ53EP0 1204 aaKnown RBP4.22□□□□□ -1.73
CCDC93-209ENST00000488908 C2orf27AQ580R0 203 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 CREB3L3Q68CJ9 461 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 ANKS6Q68DC2 871 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 ESPNLQ6ZVH7 1005 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 ARHGEF25Q86VW2 580 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 GAB3Q8WWW8 586 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 FDXACB1Q9BRP7 624 aaPredicted RBP4.22□□□□□ -1.73
CCDC93-209ENST00000488908 ZMAT4Q9H898 229 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 SEMA4GQ9NTN9 838 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 OXSMQ9NWU1 459 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 PTCH2Q9Y6C5 1203 aa4.22□□□□□ -1.73
CCDC93-209ENST00000488908 A0A1W2PR48 441 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 DNAJC8O75937 253 aaPredicted RBP4.21□□□□□ -1.74
CCDC93-209ENST00000488908 CFIP05156 583 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 PFKMP08237 780 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 RARRES1P49788 294 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 MGAT5Q09328 741 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 LRRC32Q14392 662 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 BMT2Q1RMZ1 405 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 SPDYE7PQ495Y7 208 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 GLB1L2Q8IW92 636 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 RNF169Q8NCN4 708 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 ZFP28Q8NHY6 868 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 ZNF428Q96B54 188 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 CLUHP3Q96NS8 147 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 SRPK1Q96SB4 655 aaKnown RBP4.21□□□□□ -1.74
CCDC93-209ENST00000488908 TANGO6Q9C0B7 1094 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 ATP11BQ9Y2G3 1177 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 ZKSCAN5Q9Y2L8 839 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 ZMYM3Q14202 1370 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 COL3A1P02461 1466 aaPredicted RBP4.21□□□□□ -1.74
CCDC93-209ENST00000488908 SALL3Q9BXA9 1300 aa4.21□□□□□ -1.74
CCDC93-209ENST00000488908 LTA4HP09960 611 aaKnown RBP4.2□□□□□ -1.74
CCDC93-209ENST00000488908 JMJD7P0C870 316 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 CACNA2D1P54289 1103 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 MAPK7Q13164 816 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 UBE3CQ15386 1083 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 ZBTB41Q5SVQ8 909 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 Q6ZNX1 250 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 PASD1Q8IV76 773 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 Q96MF0 132 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 MTFR1LQ9H019 292 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 KMT5AQ9NQR1 393 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 LRIT1Q9P2V4 623 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 MSRAQ9UJ68 235 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 NOX1Q9Y5S8 564 aa4.2□□□□□ -1.74
CCDC93-209ENST00000488908 PRAMEF4O60810 478 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 PROP1O75360 226 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 ITGA10O75578 1167 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 C1QL1O75973 258 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 GTF2F1P35269 517 aaKnown RBP eCLIP4.19□□□□□ -1.74
CCDC93-209ENST00000488908 SCAPQ12770 1279 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 CFAP100Q494V2 611 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 NAALADL2Q58DX5 795 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 AGAP9Q5VTM2 703 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 METRNLQ641Q3 311 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 CDCA2Q69YH5 1023 aaPredicted RBP4.19□□□□□ -1.74
CCDC93-209ENST00000488908 PDZD4Q76G19 769 aaPredicted RBP4.19□□□□□ -1.74
CCDC93-209ENST00000488908 GPR149Q86SP6 731 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 EFHBQ8N7U6 833 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 C9orf106Q8NAJ2 232 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 NEU1Q99519 415 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 C1QTNF7Q9BXJ2 289 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 IFT57Q9NWB7 429 aa4.19□□□□□ -1.74
CCDC93-209ENST00000488908 H2AFY2Q9P0M6 372 aaPredicted RBP4.19□□□□□ -1.74
CCDC93-209ENST00000488908 LRRC3CA6NJW4 275 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 MGST3O14880 152 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 IKBKBO14920 756 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 GAS7O60861 476 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 ATP2A2P16615 1042 aaKnown RBP4.18□□□□□ -1.74
CCDC93-209ENST00000488908 ZNF81P51508 661 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 MEF2AQ02078 507 aaPredicted RBP4.18□□□□□ -1.74
CCDC93-209ENST00000488908 C19orf54Q5BKX5 351 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 C1QL2Q7Z5L3 287 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 MAPKAPK5Q8IW41 473 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms