RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 C1QTNF3Q9BXJ4 246 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 GPR87Q9BY21 358 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 KRTAP3-1Q9BYR8 98 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 ASPSCR1Q9BZE9 553 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 SENP6Q9GZR1 1112 aaPredicted RBP5.32□□□□□ -1.56
SSR1-209ENST00000488834 ZNF277Q9NRM2 450 aaPredicted RBP5.32□□□□□ -1.56
SSR1-209ENST00000488834 SPEF1Q9Y4P9 236 aa5.32□□□□□ -1.56
SSR1-209ENST00000488834 FAM171A2A8MVW0 826 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 GOLGA6L6A8MZA4 724 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 PRR5-ARHGAP8B1AHC4 643 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 NDUFS2O75306 463 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 SNUPNO95149 360 aaKnown RBP5.31□□□□□ -1.56
SSR1-209ENST00000488834 INSRRP14616 1297 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 HK1P19367 917 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 MCAMP43121 646 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 MAN2A2P49641 1150 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 EXOSC10Q01780 885 aaKnown RBP5.31□□□□□ -1.56
SSR1-209ENST00000488834 PCBP2Q15366 365 aaKnown RBP eCLIP5.31□□□□□ -1.56
SSR1-209ENST00000488834 USP39Q53GS9 565 aaKnown RBP5.31□□□□□ -1.56
SSR1-209ENST00000488834 PRAMEF14Q5SWL7 426 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 Q6ZSN1 163 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 ZBTB46Q86UZ6 589 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 RPUSD2Q8IZ73 545 aaKnown RBP5.31□□□□□ -1.56
SSR1-209ENST00000488834 PQLC1Q8N2U9 271 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 OR7D4Q8NG98 312 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 JADE3Q92613 823 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 C7orf25Q9BPX7 421 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 BCO1Q9HAY6 547 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 SPON1Q9HCB6 807 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 HECAQ9UBI9 543 aaPredicted RBP5.31□□□□□ -1.56
SSR1-209ENST00000488834 INTUQ9ULD6 942 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 TESMINQ9Y4I5 508 aa5.31□□□□□ -1.56
SSR1-209ENST00000488834 ADCY6O43306 1168 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 ACRV1P26436 265 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 KIF23Q02241 960 aaPredicted RBP5.3□□□□□ -1.56
SSR1-209ENST00000488834 MIGA2Q7L4E1 593 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 XYLT1Q86Y38 959 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 C1orf210Q8IVY1 113 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 REPS2Q8NFH8 660 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 MDGA1Q8NFP4 955 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 FBXO18Q8NFZ0 1043 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 CCHCR1Q8TD31 782 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 TEKT5Q96M29 485 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 FAM193BQ96PV7 902 aaPredicted RBP5.3□□□□□ -1.56
SSR1-209ENST00000488834 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 CSRNP2Q9H175 543 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 LANCL2Q9NS86 450 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 TMEM140Q9NV12 185 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 TYW1Q9NV66 732 aaKnown RBP5.3□□□□□ -1.56
SSR1-209ENST00000488834 AURKAIP1Q9NWT8 199 aaPredicted RBP5.3□□□□□ -1.56
SSR1-209ENST00000488834 MOCS1Q9NZB8 636 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 TRPS1Q9UHF7 1281 aa5.3□□□□□ -1.56
SSR1-209ENST00000488834 ZMYM3Q14202 1370 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 TNKSO95271 1327 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 B5MCH6 92 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 RAP2AP10114 183 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 PTH1RQ03431 593 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 PPP3CAQ08209 521 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 MGAT2Q10469 447 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 PUM1Q14671 1186 aaKnown RBP eCLIP5.29□□□□□ -1.562e-9■■□□□ 14.3
SSR1-209ENST00000488834 R3HDM1Q15032 1099 aaKnown RBP5.29□□□□□ -1.56
SSR1-209ENST00000488834 UAP1L1Q3KQV9 507 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 SPTY2D1Q68D10 685 aaPredicted RBP5.29□□□□□ -1.56
SSR1-209ENST00000488834 Q6ZVL8 140 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 SPRED1Q7Z699 444 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 GGNQ86UU5 652 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 RHOT1Q8IXI2 618 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 TRMT2AQ8IZ69 625 aaKnown RBP5.29□□□□□ -1.56
SSR1-209ENST00000488834 NRG4Q8WWG1 115 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 DPF2Q92785 391 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 ENKD1Q9H0I2 346 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 MANSC1Q9H8J5 431 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 AASDHPPTQ9NRN7 309 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 DDX56Q9NY93 547 aaKnown RBP5.29□□□□□ -1.56
SSR1-209ENST00000488834 POGKQ9P215 609 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 SCOCQ9UIL1 159 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 CLCA2Q9UQC9 943 aa5.29□□□□□ -1.56
SSR1-209ENST00000488834 PCDHGA12O60330 932 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 CT47B1P0C2W7 299 aaPredicted RBP5.28□□□□□ -1.56
SSR1-209ENST00000488834 IL2RBP14784 551 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 C5AR1P21730 350 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 RECQLP46063 649 aaPredicted RBP5.28□□□□□ -1.56
SSR1-209ENST00000488834 FLT3LGP49771 235 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 SCNN1GP51170 649 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 KRT85P78386 507 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 RRP1BQ14684 758 aaKnown RBP5.28□□□□□ -1.56
SSR1-209ENST00000488834 CDSNQ15517 529 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 ZXDCQ2QGD7 858 aaPredicted RBP5.28□□□□□ -1.56
SSR1-209ENST00000488834 EFCAB12Q6NXP0 572 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 DBX2Q6ZNG2 339 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 Q6ZRM9 215 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 RSPH3Q86UC2 560 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 MIER2Q8N344 545 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 LILRA3Q8N6C8 439 aaPredicted RBP5.28□□□□□ -1.56
SSR1-209ENST00000488834 STON2Q8WXE9 905 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 TFAP2CQ92754 450 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 EXTL1Q92935 676 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 HDAC10Q969S8 669 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 CHMP4CQ96CF2 233 aa5.28□□□□□ -1.56
SSR1-209ENST00000488834 PLEKHG4BQ96PX9 1271 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms