RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 POLR2DO15514 142 aaKnown RBP12.13□□□□□ -0.47
NUP98-212ENST00000488828 ZNF623O75123 536 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 CSPG5O95196 566 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 IDEP14735 1019 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 MATR3P43243 847 aaKnown RBP eCLIP12.13□□□□□ -0.47
NUP98-212ENST00000488828 GIT2Q14161 759 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 CDCA2Q69YH5 1023 aaPredicted RBP12.13□□□□□ -0.47
NUP98-212ENST00000488828 SHC4Q6S5L8 630 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 APBB1IPQ7Z5R6 666 aaPredicted RBP12.13□□□□□ -0.47
NUP98-212ENST00000488828 URGCPQ8TCY9 931 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 LRRC15Q8TF66 581 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 GDPD5Q8WTR4 605 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 LEO1Q8WVC0 666 aaPredicted RBP12.13□□□□□ -0.47
NUP98-212ENST00000488828 STAMQ92783 540 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 CCDC51Q96ER9 411 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 BICD1Q96G01 975 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 PCMTD1Q96MG8 357 aaPredicted RBP12.13□□□□□ -0.47
NUP98-212ENST00000488828 CASD1Q96PB1 797 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 FAM193BQ96PV7 902 aaPredicted RBP12.13□□□□□ -0.47
NUP98-212ENST00000488828 TRAIPQ9BWF2 469 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 LRRC27Q9C0I9 530 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 GBP3Q9H0R5 595 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 PARVGQ9HBI0 331 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 PARP2Q9UGN5 583 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 ODF2LQ9ULJ1 636 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 HES2Q9Y543 173 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 TTC3P53804 2025 aa12.13□□□□□ -0.47
NUP98-212ENST00000488828 GBF1Q92538 1859 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 GOLGA6L4A6NEF3 574 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 RB1P06400 928 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 AMPD3Q01432 767 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 MAPK7Q13164 816 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 ADGRE1Q14246 886 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 SKIV2LQ15477 1246 aaKnown RBP12.12□□□□□ -0.47
NUP98-212ENST00000488828 PTPROQ16827 1216 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 FAM187BQ17R55 369 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 NOMO2Q5JPE7 1267 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 CLLU1OSQ5K130 101 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 UBXN11Q5T124 520 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 AXDND1Q5T1B0 1012 aaPredicted RBP12.12□□□□□ -0.47
NUP98-212ENST00000488828 ATF7IP2Q5U623 682 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 ZBTB33Q86T24 672 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 ZNF598Q86UK7 904 aaKnown RBP12.12□□□□□ -0.47
NUP98-212ENST00000488828 FAM178BQ8IXR5 827 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 MAFAQ8NHW3 353 aaPredicted RBP12.12□□□□□ -0.47
NUP98-212ENST00000488828 SPIRE2Q8WWL2 714 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 NTPCRQ9BSD7 190 aaKnown RBP12.12□□□□□ -0.47
NUP98-212ENST00000488828 C11orf84Q9BUA3 381 aaPredicted RBP12.12□□□□□ -0.47
NUP98-212ENST00000488828 MRPL9Q9BYD2 267 aaKnown RBP12.12□□□□□ -0.47
NUP98-212ENST00000488828 MRPL4Q9BYD3 311 aaKnown RBP12.12□□□□□ -0.47
NUP98-212ENST00000488828 TMEM134Q9H6X4 195 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 RSAD1Q9HA92 442 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 UBN1Q9NPG3 1134 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 IPPQ9Y573 584 aa12.12□□□□□ -0.47
NUP98-212ENST00000488828 PHLPP2Q6ZVD8 1323 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 CNTNAP2Q9UHC6 1331 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 A0A087X0B3 334 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 MYMKA6NI61 221 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 MEIS3P2A8K0S8 358 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 K7ENM7 598 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 TRAK2O60296 914 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 OFD1O75665 1012 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 POMCP01189 267 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 HARSP12081 509 aaKnown RBP12.11□□□□□ -0.47
NUP98-212ENST00000488828 ATF7P17544 494 aaPredicted RBP12.11□□□□□ -0.47
NUP98-212ENST00000488828 AKAP5P24588 427 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 ALDH7A1P49419 539 aaKnown RBP12.11□□□□□ -0.47
NUP98-212ENST00000488828 NAALADL2Q58DX5 795 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 HERC4Q5GLZ8 1057 aaPredicted RBP12.11□□□□□ -0.47
NUP98-212ENST00000488828 NT5DC1Q5TFE4 455 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 HAUS6Q7Z4H7 955 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 MRPL10Q7Z7H8 261 aaKnown RBP12.11□□□□□ -0.47
NUP98-212ENST00000488828 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 CEP57L1Q8IYX8 460 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 LRRC43Q8N309 656 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 SMG8Q8ND04 991 aaKnown RBP12.11□□□□□ -0.47
NUP98-212ENST00000488828 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 CLP1Q92989 425 aaKnown RBP12.11□□□□□ -0.47
NUP98-212ENST00000488828 TARS2Q9BW92 718 aaKnown RBP12.11□□□□□ -0.47
NUP98-212ENST00000488828 CCDC113Q9H0I3 377 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 PDZD7Q9H5P4 517 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 RC3H2Q9HBD1 1191 aaKnown RBP12.11□□□□□ -0.47
NUP98-212ENST00000488828 GDPD2Q9HCC8 539 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 ALG13Q9NP73 1137 aaKnown RBP12.11□□□□□ -0.47
NUP98-212ENST00000488828 KLK14Q9P0G3 267 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 TBC1D7Q9P0N9 293 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 KANSL3Q9P2N6 904 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 KCNH3Q9ULD8 1083 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 GDAQ9Y2T3 454 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 SZT2Q5T011 3432 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
NUP98-212ENST00000488828 CHD9Q3L8U1 2897 aa12.1□□□□□ -0.47
NUP98-212ENST00000488828 A0A1B0GVL5 298 aa12.1□□□□□ -0.47
NUP98-212ENST00000488828 H3BNC9 293 aa12.1□□□□□ -0.47
NUP98-212ENST00000488828 ZC3H11AO75152 810 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP98-212ENST00000488828 LAG3P18627 525 aa12.1□□□□□ -0.47
NUP98-212ENST00000488828 CMA1P23946 247 aa12.1□□□□□ -0.47
NUP98-212ENST00000488828 OSTNP61366 133 aa12.1□□□□□ -0.47
NUP98-212ENST00000488828 KRT17Q04695 432 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms