RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 HIPK4Q8NE63 616 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 DTNBP1Q96EV8 351 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 ZNF184Q99676 751 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-229ENST00000488765 CCSER1Q9C0I3 900 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 ARL8BQ9NVJ2 186 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 RIC1Q4ADV7 1423 aa17.28■□□□□ 0.36
MCF2L-229ENST00000488765 RTL9Q8NET4 1388 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 PALM3A6NDB9 673 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-229ENST00000488765 ABLIM1O14639 778 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 RRP1BQ14684 758 aaKnown RBP17.27■□□□□ 0.36
MCF2L-229ENST00000488765 ACAP1Q15027 740 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 PHLDB2Q86SQ0 1253 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 SH3TC2Q8TF17 1288 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 FBXO41Q8TF61 875 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 TIPINQ9BVW5 301 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 ATP8A2Q9NTI2 1148 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 MROH5Q6ZUA9 1318 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 PSMG1O95456 288 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 TRAPPC10P48553 1259 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 PLOD1Q02809 727 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-229ENST00000488765 ALX1Q15699 326 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 MAP7D3Q8IWC1 876 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 RASGEF1CQ8N431 466 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 ATG4AQ8WYN0 398 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 HES6Q96HZ4 224 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 BLOC1S4Q9NUP1 217 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 SUCLA2Q9P2R7 463 aaPredicted RBP17.27■□□□□ 0.36
MCF2L-229ENST00000488765 RASAL2Q9UJF2 1139 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 PCDHA4Q9UN74 947 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.36
MCF2L-229ENST00000488765 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-229ENST00000488765 ATMINO43313 823 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-229ENST00000488765 NTSR2O95665 410 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 PYGMP11217 842 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 ZBTB16Q05516 673 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 ZYXQ15942 572 aaKnown RBP17.26■□□□□ 0.35
MCF2L-229ENST00000488765 CAVIN4Q5BKX8 364 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 FAM161BQ96MY7 647 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 THAP2Q9H0W7 228 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 GRID1Q9ULK0 1009 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 BHMG1C9JSJ3 638 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-229ENST00000488765 ITGA2BP08514 1039 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 OR52Z1P0C646 297 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 GNAT2P19087 354 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 CALCOCO2Q13137 446 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 PLEKHG4Q58EX7 1191 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 ZNF746Q6NUN9 644 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-229ENST00000488765 CCDC125Q86Z20 511 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 SHKBP1Q8TBC3 707 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 LARP4BQ92615 738 aaKnown RBP17.26■□□□□ 0.35
MCF2L-229ENST00000488765 CCNL1Q9UK58 526 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-229ENST00000488765 E7ENQ6 273 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 CAPN15O75808 1086 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 PIK3CAP42336 1068 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 MESDQ14696 234 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 ARHGEF18Q6ZSZ5 1173 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 TTC7BQ86TV6 843 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 TXNRD3Q86VQ6 643 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 ARHGAP18Q8N392 663 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 CTNNBL1Q8WYA6 563 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-229ENST00000488765 IQCDQ96DY2 449 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 ANKRD27Q96NW4 1050 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 EBF3Q9H4W6 596 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 BCAS3Q9H6U6 928 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 TMEM260Q9NX78 707 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 STXBP5LQ9Y2K9 1186 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 TNS2Q63HR2 1409 aa17.26■□□□□ 0.35
MCF2L-229ENST00000488765 TSPY2A6NKD2 308 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 DDX3YO15523 660 aaKnown RBP17.25■□□□□ 0.35
MCF2L-229ENST00000488765 HARSP12081 509 aaKnown RBP17.25■□□□□ 0.35
MCF2L-229ENST00000488765 RARGP13631 454 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 VAV1P15498 845 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 GRIA2P42262 883 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 LSAMPQ13449 338 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 ARHGAP44Q17R89 818 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 KCTD21Q4G0X4 260 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 WASHC2DQ5SRD0 308 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 PAOXQ6QHF9 649 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 NLRP9Q7RTR0 991 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 PRPF31Q8WWY3 499 aaKnown RBP17.25■□□□□ 0.35
MCF2L-229ENST00000488765 HSPBAP1Q96EW2 488 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 MAGEB18Q96M61 343 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 KLF6Q99612 283 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-229ENST00000488765 ASCC2Q9H1I8 757 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-229ENST00000488765 AIPL1Q9NZN9 384 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 PDP2Q9P2J9 529 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 PASKQ96RG2 1323 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 GOLGA8RI6L899 631 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 DLATP10515 647 aaKnown RBP17.25■□□□□ 0.35
MCF2L-229ENST00000488765 GRB10Q13322 594 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 HERC4Q5GLZ8 1057 aaPredicted RBP17.25■□□□□ 0.35
MCF2L-229ENST00000488765 MYOCOSA0A1B0GUC4 107 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 LRRN2O75325 713 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 FGFR1P11362 822 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 PTPN4P29074 926 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 IL9RQ01113 521 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 RINLQ6ZS11 566 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 CFAP61Q8NHU2 1237 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 FBXO27Q8NI29 283 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms