RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PDZD4Q76G19 769 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 FUKQ8N0W3 1084 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 PQLC1Q8N2U9 271 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 OR7D4Q8NG98 312 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 MDM1Q8TC05 714 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 IL17RAQ96F46 866 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 RTFDC1Q9BY42 306 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 SENP6Q9GZR1 1112 aaPredicted RBP5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 BCO1Q9HAY6 547 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 TCF7L1Q9HCS4 588 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 PLA2G3Q9NZ20 509 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 TRPS1Q9UHF7 1281 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 SERPINB13Q9UIV8 391 aa5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 NOB1Q9ULX3 412 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 ZFR2Q9UPR6 939 aaKnown RBP5.04□□□□□ -1.6
ECHDC1-217ENST00000488087 HTRA2O43464 458 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 FOXS1O43638 330 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 DTNBO60941 627 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 ITGB3P05106 788 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 MSX2P35548 267 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 APBA1Q02410 837 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 SEPT2Q15019 361 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 LRRC41Q15345 812 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 TPH2Q8IWU9 490 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 LILRA3Q8N6C8 439 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 FBXO18Q8NFZ0 1043 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 OR2I1PQ8NGU4 316 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 CCHCR1Q8TD31 782 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 LOXL4Q96JB6 756 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 C20orf173Q96LM9 149 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 CAMKK2Q96RR4 588 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 NUP88Q99567 741 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 PDCD2LQ9BRP1 358 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 LDAHQ9H6V9 325 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 MANSC1Q9H8J5 431 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 LANCL2Q9NS86 450 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 RAPGEFL1Q9UHV5 662 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 PNMA8BQ9ULN7 279 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 LIMCH1Q9UPQ0 1083 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 PCDHA13Q9Y5I0 950 aa5.03□□□□□ -1.6
ECHDC1-217ENST00000488087 RAD17O75943 681 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 STC2O76061 302 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 RPLP2P05387 115 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 CYP2C19P33261 490 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 SREBF1P36956 1147 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 WASP42768 502 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 HHEXQ03014 270 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 FOXL1Q12952 345 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 DUSP8Q13202 625 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 FAM214AQ32MH5 1076 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 C3orf36Q3SXR2 165 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 RRP12Q5JTH9 1297 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 PRAMEF14Q5SWL7 426 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 FKBP15Q5T1M5 1219 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 IFIT1BQ5T764 474 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 PPP4R3AQ6IN85 833 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 CATIPQ7Z7H3 387 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 RSPH3Q86UC2 560 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 FMNL3Q8IVF7 1028 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 TRMT2AQ8IZ69 625 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 D2HGDHQ8N465 521 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 REPS2Q8NFH8 660 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 HOXB13Q92826 284 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 RAB24Q969Q5 203 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 LRGUKQ96M69 825 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 ZNF512Q96ME7 567 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 TDP1Q9NUW8 608 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 TMEM140Q9NV12 185 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 HDAC5Q9UQL6 1122 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 IPPQ9Y573 584 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 ZMYM3Q14202 1370 aa5.02□□□□□ -1.61
ECHDC1-217ENST00000488087 K7ESM1 405 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 HOXA3O43365 443 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 TSPAN6O43657 245 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 OFD1O75665 1012 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 RFPL1O75677 317 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 GNAT2P19087 354 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 PDCP20941 246 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 COMTP21964 271 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 AKAP5P24588 427 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 SLC6A9P48067 706 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 MRPL49Q13405 166 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 IL10RAQ13651 578 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 ELAVL1Q15717 326 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 HS1BP3Q53T59 392 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 MFSD5Q6N075 450 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 POLNQ7Z5Q5 900 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 WDR75Q8IWA0 830 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 CHST13Q8NET6 341 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 CXorf38Q8TB03 319 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 STON2Q8WXE9 905 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 KAT5Q92993 513 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 TSR2Q969E8 191 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 RELTQ969Z4 430 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 CYFIP2Q96F07 1278 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 RBM15Q96T37 977 aaKnown RBP eCLIP5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 AJAP1Q9UKB5 411 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 SIK3Q9Y2K2 1263 aa5.01□□□□□ -1.61
ECHDC1-217ENST00000488087 SLC30A1Q9Y6M5 507 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms