RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 CACNB1Q02641 598 aaPredicted RBP26.12■■□□□ 1.77
RNF38-208ENST00000488058 KARSQ15046 597 aaKnown RBP26.12■■□□□ 1.77
RNF38-208ENST00000488058 LLGL2Q6P1M3 1020 aa26.12■■□□□ 1.77
RNF38-208ENST00000488058 DDX53Q86TM3 631 aaKnown RBP26.12■■□□□ 1.77
RNF38-208ENST00000488058 AUTS2Q8WXX7 1259 aa26.12■■□□□ 1.77
RNF38-208ENST00000488058 SNTG2Q9NY99 539 aa26.12■■□□□ 1.77
RNF38-208ENST00000488058 XIRP2A4UGR9 3374 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 NPHP3-ACAD11A0A0J9YXS1 232 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 SLC26A4O43511 780 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 CXCL14O95715 111 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 PLCG1P19174 1290 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 PTPAQ15257 358 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 SPECC1Q5M775 1068 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 NT5DC1Q5TFE4 455 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 ATF7IP2Q5U623 682 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 COLGALT2Q8IYK4 626 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 TMEM87AQ8NBN3 555 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 ZBP1Q9H171 429 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 CLEC1BQ9P126 229 aa26.11■■□□□ 1.77
RNF38-208ENST00000488058 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.1■■□□□ 1.77
RNF38-208ENST00000488058 FSD2A1L4K1 749 aa26.1■■□□□ 1.77
RNF38-208ENST00000488058 C2orf71A6NGG8 1288 aa26.1■■□□□ 1.77
RNF38-208ENST00000488058 INPPL1O15357 1258 aa26.1■■□□□ 1.77
RNF38-208ENST00000488058 SLC16A4O15374 487 aa26.1■■□□□ 1.77
RNF38-208ENST00000488058 MBTPS2O43462 519 aa26.1■■□□□ 1.77
RNF38-208ENST00000488058 MRPL43Q8N983 215 aaKnown RBP26.1■■□□□ 1.77
RNF38-208ENST00000488058 VN1R2Q8NFZ6 395 aa26.1■■□□□ 1.77
RNF38-208ENST00000488058 ZSCAN16Q9H4T2 348 aaPredicted RBP26.1■■□□□ 1.77
RNF38-208ENST00000488058 C17orf75Q9HAS0 396 aa26.1■■□□□ 1.77
RNF38-208ENST00000488058 VCANP13611 3396 aa26.1■■□□□ 1.77
RNF38-208ENST00000488058 CUL9Q8IWT3 2517 aa26.1■■□□□ 1.77
RNF38-208ENST00000488058 SRGAP2BP0DMP2 458 aa26.09■■□□□ 1.77
RNF38-208ENST00000488058 SMAD4Q13485 552 aaKnown RBP26.09■■□□□ 1.77
RNF38-208ENST00000488058 DCAF4L1Q3SXM0 396 aa26.09■■□□□ 1.77
RNF38-208ENST00000488058 FOXD4L5Q5VV16 416 aaPredicted RBP26.09■■□□□ 1.77
RNF38-208ENST00000488058 GPBP1Q86WP2 473 aa26.09■■□□□ 1.77
RNF38-208ENST00000488058 FAM178BQ8IXR5 827 aa26.09■■□□□ 1.77
RNF38-208ENST00000488058 FOXD4L4Q8WXT5 416 aaPredicted RBP26.09■■□□□ 1.77
RNF38-208ENST00000488058 USP28Q96RU2 1077 aa26.09■■□□□ 1.77
RNF38-208ENST00000488058 TMEM134Q9H6X4 195 aa26.09■■□□□ 1.77
RNF38-208ENST00000488058 KCND2Q9NZV8 630 aa26.09■■□□□ 1.77
RNF38-208ENST00000488058 GDAQ9Y2T3 454 aa26.09■■□□□ 1.77
RNF38-208ENST00000488058 MYH15Q9Y2K3 1946 aa26.09■■□□□ 1.77
RNF38-208ENST00000488058 NR1I2O75469 434 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 RECQL4O94761 1208 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 CTSAP10619 480 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 PLS3P13797 630 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 SSTR3P32745 418 aaPredicted RBP26.08■■□□□ 1.77
RNF38-208ENST00000488058 DSC1Q08554 894 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 GRIK3Q13003 919 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 MCM6Q14566 821 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 APBB1IPQ7Z5R6 666 aaPredicted RBP26.08■■□□□ 1.77
RNF38-208ENST00000488058 SPRYD3Q8NCJ5 442 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 GSTCDQ8NEC7 633 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 LRRC15Q8TF66 581 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 EPSTI1Q96J88 318 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 MSLNLQ96KJ4 702 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 VN1R3Q9BXE9 311 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 MRPL4Q9BYD3 311 aaKnown RBP26.08■■□□□ 1.77
RNF38-208ENST00000488058 BLOC1S4Q9NUP1 217 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 ARHGAP28Q9P2N2 729 aa26.08■■□□□ 1.77
RNF38-208ENST00000488058 FBXO2Q9UK22 296 aaPredicted RBP26.08■■□□□ 1.77
RNF38-208ENST00000488058 RBM19Q9Y4C8 960 aaKnown RBP26.08■■□□□ 1.77
RNF38-208ENST00000488058 SPTBN5Q9NRC6 3674 aaKnown RBP26.08■■□□□ 1.77
RNF38-208ENST00000488058 KRT18P05783 430 aaKnown RBP26.07■■□□□ 1.76
RNF38-208ENST00000488058 SMTNP53814 917 aa26.07■■□□□ 1.76
RNF38-208ENST00000488058 USP49Q70CQ1 688 aa26.07■■□□□ 1.76
RNF38-208ENST00000488058 TAS1R3Q7RTX0 852 aa26.07■■□□□ 1.76
RNF38-208ENST00000488058 RAD54LQ92698 747 aa26.07■■□□□ 1.76
RNF38-208ENST00000488058 CLIC6Q96NY7 704 aa26.07■■□□□ 1.76
RNF38-208ENST00000488058 TARS2Q9BW92 718 aaKnown RBP26.07■■□□□ 1.76
RNF38-208ENST00000488058 MARCH5Q9NX47 278 aa26.07■■□□□ 1.76
RNF38-208ENST00000488058 TNFSF13BQ9Y275 285 aa26.07■■□□□ 1.76
RNF38-208ENST00000488058 ZMYM2Q9UBW7 1377 aa26.07■■□□□ 1.76
RNF38-208ENST00000488058 STRN3Q13033 797 aa26.06■■□□□ 1.76
RNF38-208ENST00000488058 ZNF568Q3ZCX4 644 aa26.06■■□□□ 1.76
RNF38-208ENST00000488058 ARSHQ5FYA8 562 aa26.06■■□□□ 1.76
RNF38-208ENST00000488058 ZBTB33Q86T24 672 aa26.06■■□□□ 1.76
RNF38-208ENST00000488058 RABGGTAQ92696 567 aa26.06■■□□□ 1.76
RNF38-208ENST00000488058 ACO2Q99798 780 aaKnown RBP26.06■■□□□ 1.76
RNF38-208ENST00000488058 REEP2Q9BRK0 252 aa26.06■■□□□ 1.76
RNF38-208ENST00000488058 COLEC11Q9BWP8 271 aa26.06■■□□□ 1.76
RNF38-208ENST00000488058 APOL5Q9BWW9 433 aa26.06■■□□□ 1.76
RNF38-208ENST00000488058 CCSER1Q9C0I3 900 aa26.06■■□□□ 1.76
RNF38-208ENST00000488058 SRPRBQ9Y5M8 271 aaKnown RBP26.06■■□□□ 1.76
RNF38-208ENST00000488058 F8W810 466 aa26.05■■□□□ 1.76
RNF38-208ENST00000488058 CLASP2O75122 1294 aaKnown RBP26.05■■□□□ 1.76
RNF38-208ENST00000488058 HARSP12081 509 aaKnown RBP26.05■■□□□ 1.76
RNF38-208ENST00000488058 TXLNAP40222 546 aa26.05■■□□□ 1.76
RNF38-208ENST00000488058 COASYQ13057 564 aa26.05■■□□□ 1.76
RNF38-208ENST00000488058 GIT2Q14161 759 aa26.05■■□□□ 1.76
RNF38-208ENST00000488058 SPIRE2Q8WWL2 714 aa26.05■■□□□ 1.76
RNF38-208ENST00000488058 LARP4BQ92615 738 aaKnown RBP26.05■■□□□ 1.76
RNF38-208ENST00000488058 TCHPQ9BT92 498 aa26.05■■□□□ 1.76
RNF38-208ENST00000488058 ZHX3Q9H4I2 956 aa26.05■■□□□ 1.76
RNF38-208ENST00000488058 CD320Q9NPF0 282 aa26.05■■□□□ 1.76
RNF38-208ENST00000488058 LARSQ9P2J5 1176 aaKnown RBP26.05■■□□□ 1.76
RNF38-208ENST00000488058 CACNG4Q9UBN1 327 aa26.05■■□□□ 1.76
RNF38-208ENST00000488058 CCDC39Q9UFE4 941 aa26.05■■□□□ 1.76
RNF38-208ENST00000488058 KCNG1Q9UIX4 513 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms