RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 TRHDEQ9UKU6 1024 aa5□□□□□ -1.61
HMGB1P36-201ENST00000487709 E2F8A0AVK6 867 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 SHTN1A0MZ66 631 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 K7ESF4 209 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 B3GALT2O43825 422 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 MFAP3LO75121 409 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 IPO13O94829 963 aaKnown RBP4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 PRPF6O94906 941 aaKnown RBP4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 CT47B1P0C2W7 299 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 RGS3P49796 1198 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 EPHB1P54762 984 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 CLUL1Q15846 466 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 PLEKHG6Q3KR16 790 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 TIGD2Q4W5G0 525 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 MFSD5Q6N075 450 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 OLFML1Q6UWY5 402 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 LHFPL2Q6ZUX7 228 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 RTN4RL1Q86UN2 441 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 PNMA8AQ86V59 439 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 CXorf67Q86X51 503 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 CHMP4CQ96CF2 233 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 PAWRQ96IZ0 340 aaKnown RBP4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 ZNF512Q96ME7 567 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 MYL10Q9BUA6 226 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 MKS1Q9NXB0 559 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 KCMF1Q9P0J7 381 aa4.99□□□□□ -1.61
HMGB1P36-201ENST00000487709 WASHC2CQ9Y4E1 1318 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 GRXCR1A8MXD5 290 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 ALDH1L1O75891 902 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 SNUPNO95149 360 aaKnown RBP4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 VSIG10L2P0DP72 767 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 MYBL2P10244 700 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 HK1P19367 917 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 ENPP1P22413 925 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 NEK2P51955 445 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 NRG3P56975 720 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 SCAND1P57086 179 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 SPIDRQ14159 915 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 FSCN1Q16658 493 aaKnown RBP4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 DGKDQ16760 1214 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 UGT8Q16880 541 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 GAGE13Q4V321 117 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 PGM2L1Q6PCE3 622 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 HTR3DQ70Z44 454 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 MDGA1Q8NFP4 955 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 JDP2Q8WYK2 163 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 FOXRED1Q96CU9 486 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 HIST1H2AHQ96KK5 128 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 FAM193BQ96PV7 902 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 HIST1H2AJQ99878 128 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 CYP4F11Q9HBI6 524 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 AASDHPPTQ9NRN7 309 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 TOPORSQ9NS56 1045 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 HS3ST4Q9Y661 456 aa4.98□□□□□ -1.61
HMGB1P36-201ENST00000487709 STC2O76061 302 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 SCAF4O95104 1147 aaKnown RBP4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 GNAT2P19087 354 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 CD38P28907 300 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 SLC5A3P53794 718 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 KRTAP10-11P60412 298 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 MAN2A1Q16706 1144 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 CCDC178Q5BJE1 867 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 COLEC12Q5KU26 742 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 GJC2Q5T442 439 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 CCDC62Q6P9F0 684 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 FAM180AQ6UWF9 173 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 CDYL2Q8N8U2 506 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 PLA2G15Q8NCC3 412 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 ST8SIA2Q92186 375 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 NKD2Q969F2 451 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 ASPSCR1Q9BZE9 553 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 TOR3AQ9H497 397 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 SYNPO2LQ9H987 977 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 DNAJC28Q9NX36 388 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 DNAI1Q9UI46 699 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 NUMBLQ9Y6R0 609 aa4.97□□□□□ -1.61
HMGB1P36-201ENST00000487709 XPOTO43592 962 aaKnown RBP4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 PPFIA4O75335 1185 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 VCAM1P19320 739 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 GPR15P49685 360 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 MANFP55145 182 aaKnown RBP4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 ACAP2Q15057 778 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 TTF1Q15361 905 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 PTPN21Q16825 1174 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 ABCB5Q2M3G0 1257 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 RD3Q7Z3Z2 195 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 BMP8AQ7Z5Y6 402 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 CLEC14AQ86T13 490 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 GLB1L2Q8IW92 636 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 OR14C36Q8NHC7 312 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 DYDC2Q96IM9 177 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 ZNF496Q96IT1 587 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 WDR92Q96MX6 357 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 NOL10Q9BSC4 688 aaKnown RBP4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 ANO3Q9BYT9 981 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 MTG2Q9H4K7 406 aa4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 ZNF768Q9H5H4 540 aaKnown RBP4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 POLR3BQ9NW08 1133 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P36-201ENST00000487709 A0A0A6YYK5 440 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms