RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 REV3LO60673 3130 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 SMIM22K7EJ46 135 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 GOLIM4O00461 696 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 PLA2G6O60733 806 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 RAB11FIP3O75154 756 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 CLEC3AO75596 197 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 MBD4O95243 580 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 NDUFB10O96000 172 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 C6orf222P0C671 652 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 RNF4P78317 190 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 EGR3Q06889 387 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 RAD51AP2Q09MP3 1159 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 SNW1Q13573 536 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 KCNMB1Q16558 191 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 FAM83BQ5T0W9 1011 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 SNRNP48Q6IEG0 339 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 ITPRIPQ8IWB1 547 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 FTSJ3Q8IY81 847 aaKnown RBP6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 FAM133AQ8N9E0 248 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 GMCL1P1Q8NEA9 526 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 DDX11Q96FC9 970 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 PPP1R16BQ96T49 567 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 C1QTNF1Q9BXJ1 281 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 ADAMTS10Q9H324 1103 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 PRDM12Q9H4Q4 367 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 IL1RAPL2Q9NP60 686 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 MSRAQ9UJ68 235 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 TMEM59LQ9UK28 342 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 PPT2Q9UMR5 302 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 PCDHA11Q9Y5I1 949 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 PLIN4Q96Q06 1357 aa6.06□□□□□ -1.44
R3HDM1-218ENST00000487294 ASTN1O14525 1302 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 GRIN2DO15399 1336 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 CYP2D7A0A087X1C5 515 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 LOC102724159A0A0B4J2E5 919 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 GRXCR1A8MXD5 290 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 ERC2O15083 957 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 ZBED4O75132 1171 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 HMMRO75330 724 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 TSPAN15O95858 294 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 FGBP02675 491 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 PFKMP08237 780 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 IFIT2P09913 472 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 IMPDH2P12268 514 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 AFMP43652 599 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 NMIQ13287 307 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 PWP2Q15269 919 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 AAK1Q2M2I8 961 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 ZSCAN25Q6NSZ9 544 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 ARMCX2Q7L311 632 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 TMC3Q7Z5M5 1100 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 CILP2Q8IUL8 1156 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 SIRT2Q8IXJ6 389 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 CCDC144CPQ8IYA2 1237 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 MORC4Q8TE76 937 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 SLC6A18Q96N87 628 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 FERD3LQ96RJ6 166 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 STRBPQ96SI9 672 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 UHRF1Q96T88 793 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 HDAC8Q9BY41 377 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 SLC28A3Q9HAS3 691 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 ZBTB40Q9NUA8 1239 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 FEM1BQ9UK73 627 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 ZHX1Q9UKY1 873 aaPredicted RBP6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 YBX2Q9Y2T7 364 aaKnown RBP6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 SLC4A4Q9Y6R1 1079 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 MYH7P12883 1935 aa6.05□□□□□ -1.44
R3HDM1-218ENST00000487294 ZNF536O15090 1300 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 MCM3APO60318 1980 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 ZNF503-AS2A6NEH8 195 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 FAM86C2PA6NEL3 165 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 ASB14A6NK59 587 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 GSG1L2A8MUP6 293 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 CYP2C18P33260 490 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 HK2P52789 917 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 ERVFC1P60507 584 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 TNFAIP2Q03169 654 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 ITGA7Q13683 1181 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 FSCN1Q16658 493 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 CLEC16AQ2KHT3 1053 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 TKFCQ3LXA3 575 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 FBXW10Q5XX13 1052 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 IQSEC1Q6DN90 963 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 RUFY4Q6ZNE9 571 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 RPUSD2Q8IZ73 545 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 ANKRD35Q8N283 1001 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 RBBP8NLQ8NC74 664 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 ENOX1Q8TC92 643 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 PHOSPHO2Q8TCD6 241 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 RASGRP4Q8TDF6 673 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 SYTL5Q8TDW5 730 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 CCDC120Q96HB5 630 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 DNAJC2Q99543 621 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 NUP88Q99567 741 aaPredicted RBP6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 PRDM14Q9GZV8 571 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 PUS7LQ9H0K6 701 aaKnown RBP6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 WNT8AQ9H1J5 351 aa6.04□□□□□ -1.44
R3HDM1-218ENST00000487294 HIPK3Q9H422 1215 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms