RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, human

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-C-208	ENST00000487245	ABCB4	P21439	1286 aa		28.13	■■■□□ 2.09
HLA-C-208	ENST00000487245	GTF2H1	P32780	548 aa		28.13	■■■□□ 2.09
HLA-C-208	ENST00000487245	TMC3	Q7Z5M5	1100 aa		28.13	■■■□□ 2.09
HLA-C-208	ENST00000487245	MCPH1	Q8NEM0	835 aa		28.13	■■■□□ 2.09
HLA-C-208	ENST00000487245	WNK4	Q96J92	1243 aa		28.13	■■■□□ 2.09
HLA-C-208	ENST00000487245	CEP170P1	Q96L14	293 aa		28.13	■■■□□ 2.09
HLA-C-208	ENST00000487245	SH2D3A	Q9BRG2	576 aa		28.13	■■■□□ 2.09
HLA-C-208	ENST00000487245	COG5	Q9UP83	839 aa		28.13	■■■□□ 2.09
HLA-C-208	ENST00000487245	FAM169A	Q9Y6X4	670 aa		28.13	■■■□□ 2.09
HLA-C-208	ENST00000487245	GOLGA6L10	A0A0M3HER8	536 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245		H0YCG3	227 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	MTA2	O94776	668 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	CTNNA1	P35221	906 aa	Known RBP	28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	MFAP3	P55082	362 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	DHX34	Q14147	1143 aa	Known RBP	28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	SNRNP35	Q16560	246 aa	Known RBP	28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	PTGIS	Q16647	500 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	PLEKHO2	Q8TD55	490 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	MORC4	Q8TE76	937 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	ZKSCAN4	Q969J2	545 aa	Predicted RBP	28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	TXLNGY	Q9BZA5	131 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	ZNF214	Q9UL59	606 aa	Predicted RBP	28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	DENND3	A2RUS2	1198 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	NDUFAB1	O14561	156 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	CNGA1	P29973	690 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	KRT39	Q6A163	491 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	TTC19	Q6DKK2	380 aa	Predicted RBP	28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	PALB2	Q86YC2	1186 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	MTFR1L	Q9H019	292 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	ACAD9	Q9H845	621 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	TMOD4	Q9NZQ9	345 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	COQ4	Q9Y3A0	265 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	RLF	Q13129	1914 aa		28.12	■■■□□ 2.09
HLA-C-208	ENST00000487245	ANKRD63	C9JTQ0	380 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	PPFIA2	O75334	1257 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	DGAT1	O75907	488 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	ADRB2	P07550	413 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	HMGCS2	P54868	508 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	DRG2	P55039	364 aa	Known RBP	28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	CATSPERG	Q6ZRH7	1159 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	ATP8B4	Q8TF62	1192 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	RPS6KC1	Q96S38	1066 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	TEX13B	Q9BXU2	312 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	TMEM8A	Q9HCN3	771 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	BCS1L	Q9Y276	419 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	MYPN	Q86TC9	1320 aa		28.11	■■■□□ 2.09
HLA-C-208	ENST00000487245	RTN2	O75298	545 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	STBD1	O95210	358 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	ADSS	P30520	456 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	GNPTAB	Q3T906	1256 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	DUPD1	Q68J44	220 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	FAM71A	Q8IYT1	594 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	PARD3B	Q8TEW8	1205 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	MFSD14A	Q96MC6	490 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	FBXL18	Q96ME1	805 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	HOXC10	Q9NYD6	342 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	GGA2	Q9UJY4	613 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	PPP2R3B	Q9Y5P8	575 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	COL11A1	P12107	1806 aa	Predicted RBP	28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	MYO1F	O00160	1098 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	GZMA	P12544	262 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	TADA2B	Q86TJ2	420 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	SLC20A1	Q8WUM9	679 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	JPH1	Q9HDC5	661 aa	Predicted RBP	28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	PDLIM7	Q9NR12	457 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	CYP39A1	Q9NYL5	469 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	SLC9A2	Q9UBY0	812 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	ALG6	Q9Y672	507 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	SYNGAP1	Q96PV0	1343 aa		28.1	■■■□□ 2.09
HLA-C-208	ENST00000487245	GOLGA8IP	A6NC78	632 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	GOLGA8J	A6NMD2	632 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	ZNF862	O60290	1169 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	GGPS1	O95749	300 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	GART	P22102	1010 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	FLT3	P36888	993 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	GPC3	P51654	580 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	GPC5	P78333	572 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	GUCY1A3	Q02108	690 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	TMEM132B	Q14DG7	1078 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	CBWD2	Q8IUF1	395 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	RPUSD2	Q8IZ73	545 aa	Known RBP	28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	C3orf20	Q8ND61	904 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	ZSWIM2	Q8NEG5	633 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	CELF4	Q9BZC1	486 aa	Known RBP	28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	NR2E1	Q9Y466	385 aa		28.09	■■■□□ 2.09
HLA-C-208	ENST00000487245	FTL	P02792	175 aa	Predicted RBP	28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	EIF3B	P55884	814 aa	Known RBP	28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	DR1	Q01658	176 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	NOL9	Q5SY16	702 aa	Known RBP	28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	SWSAP1	Q6NVH7	229 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	TRMT1L	Q7Z2T5	733 aa	Known RBP	28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	IFT74	Q96LB3	600 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	ERP44	Q9BS26	406 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	CD2AP	Q9Y5K6	639 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	SPATA31C2	B4DYI2	1134 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	SCP2	P22307	547 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	BRDT	Q58F21	947 aa	Predicted RBP	28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	ANGEL2	Q5VTE6	544 aa	Known RBP	28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	MIS18BP1	Q6P0N0	1132 aa		28.08	■■■□□ 2.09
HLA-C-208	ENST00000487245	UBL4B	Q8N7F7	174 aa		28.08	■■■□□ 2.09

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