RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 NENFQ9UMX5 172 aa12.61□□□□□ -0.39
PRKCB-207ENST00000486868 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-207ENST00000486868 CTAGE9A4FU28 777 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 GOLGA8IPA6NC78 632 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 GOLGA8JA6NMD2 632 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 KIF3CO14782 793 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 CLDN3O15551 220 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 KPNA6O60684 536 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
PRKCB-207ENST00000486868 PLEKP08567 350 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-207ENST00000486868 KLRC1P26715 233 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 PHKA2P46019 1235 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 GCLMP48507 274 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 NKX3-2P78367 333 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 DRP2Q13474 957 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 KIF22Q14807 665 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 ZNF569Q5MCW4 686 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 TMEM63BQ5T3F8 832 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 PHLDB3Q6NSJ2 640 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 MTHFD1LQ6UB35 978 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 CRELD2Q6UXH1 353 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-207ENST00000486868 ZNF410Q86VK4 478 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 BRSK2Q8IWQ3 736 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 TRIM58Q8NG06 486 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 DHX38Q92620 1227 aaKnown RBP12.6□□□□□ -0.39
PRKCB-207ENST00000486868 SAAL1Q96ER3 474 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 ERO1AQ96HE7 468 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 CALR3Q96L12 384 aaKnown RBP12.6□□□□□ -0.39
PRKCB-207ENST00000486868 FNBP1Q96RU3 617 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 NAPGQ99747 312 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-207ENST00000486868 SYT11Q9BT88 431 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 MSTO1Q9BUK6 570 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 SUGCTQ9HAC7 445 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 PTPRHQ9HD43 1115 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 RAB20Q9NX57 234 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 TNFSF13BQ9Y275 285 aa12.6□□□□□ -0.39
PRKCB-207ENST00000486868 ABLIM1O14639 778 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 TNPO2O14787 897 aaKnown RBP12.59□□□□□ -0.39
PRKCB-207ENST00000486868 OGTO15294 1046 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 EVI5O60447 810 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 TACC1O75410 805 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 F2P00734 622 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 C4BPAP04003 597 aaKnown RBP12.59□□□□□ -0.39
PRKCB-207ENST00000486868 CPT1AP50416 773 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 MFAP3P55082 362 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 APBA1Q02410 837 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 GCNT1Q02742 428 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 PTK2Q05397 1052 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 NOGQ13253 232 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 NAB2Q15742 525 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 ZACNQ401N2 412 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 SV2AQ7L0J3 742 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 ZNF571Q7Z3V5 609 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-207ENST00000486868 SRGAP1Q7Z6B7 1085 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 SLC35F6Q8N357 371 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 LRRC71Q8N4P6 559 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 ZSWIM2Q8NEG5 633 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 SHC3Q92529 594 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 SECISBP2LQ93073 1101 aaKnown RBP12.59□□□□□ -0.39
PRKCB-207ENST00000486868 FAXDC2Q96IV6 333 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 NT5C1BQ96P26 610 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 MAP7D2Q96T17 732 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 CGRRF1Q99675 332 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 FAM213AQ9BRX8 229 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 CFHR5Q9BXR6 569 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 GPR88Q9GZN0 384 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 LACRTQ9GZZ8 138 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 GPBP1L1Q9HC44 474 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-207ENST00000486868 DOCK5Q9H7D0 1870 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 NRCAMQ92823 1304 aa12.59□□□□□ -0.39
PRKCB-207ENST00000486868 A0A0A6YYK5 440 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-207ENST00000486868 RCCD1A6NED2 376 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 HAS3O00219 553 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 FANCGO15287 622 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 ZEB2O60315 1214 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 FAM189A1O60320 539 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 SRGAP2CP0DJJ0 459 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 PRLRP16471 622 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 FCGRTP55899 365 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 NLRP11P59045 1033 aaKnown RBP12.58□□□□□ -0.4
PRKCB-207ENST00000486868 CYP27A1Q02318 531 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 MBTD1Q05BQ5 628 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 PPFIA1Q13136 1202 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 CRHR2Q13324 411 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 GRIK4Q16099 956 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 IFI16Q16666 785 aaKnown RBP12.58□□□□□ -0.4
PRKCB-207ENST00000486868 GJC2Q5T442 439 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-207ENST00000486868 PAPD7Q5XG87 772 aaKnown RBP12.58□□□□□ -0.4
PRKCB-207ENST00000486868 MPZL3Q6UWV2 235 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 RHPN2Q8IUC4 686 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 WDR49Q8IV35 697 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 FAM71AQ8IYT1 594 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 SLC30A5Q8TAD4 765 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 CCDC127Q96BQ5 260 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 KATNAL1Q9BW62 490 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 HAPLN2Q9GZV7 340 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 UBE2TQ9NPD8 197 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-207ENST00000486868 RBAKQ9NYW8 714 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-207ENST00000486868 ADAMTS1Q9UHI8 967 aa12.58□□□□□ -0.4
PRKCB-207ENST00000486868 PLXNA1Q9UIW2 1896 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms