RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 MKRN3Q13064 507 aaKnown RBP22■■□□□ 1.11
HPS3-206ENST00000486530 BRI3BPQ8WY22 251 aa22■■□□□ 1.11
HPS3-206ENST00000486530 RUBCNQ92622 972 aa22■■□□□ 1.11
HPS3-206ENST00000486530 SEMA4DQ92854 862 aa22■■□□□ 1.11
HPS3-206ENST00000486530 FAM213AQ9BRX8 229 aa22■■□□□ 1.11
HPS3-206ENST00000486530 ABCB6Q9NP58 842 aa22■■□□□ 1.11
HPS3-206ENST00000486530 CCL15-CCL14A0A0B4J2E2 113 aa22■■□□□ 1.11
HPS3-206ENST00000486530 PDHXO00330 501 aa22■■□□□ 1.11
HPS3-206ENST00000486530 SASH3O75995 380 aa22■■□□□ 1.11
HPS3-206ENST00000486530 ARIH2O95376 493 aa22■■□□□ 1.11
HPS3-206ENST00000486530 RPS6KA1Q15418 735 aa22■■□□□ 1.11
HPS3-206ENST00000486530 CCL15Q16663 113 aa22■■□□□ 1.11
HPS3-206ENST00000486530 DNAAF5Q86Y56 855 aa22■■□□□ 1.11
HPS3-206ENST00000486530 SYCE1Q8N0S2 351 aa22■■□□□ 1.11
HPS3-206ENST00000486530 MORC4Q8TE76 937 aa22■■□□□ 1.11
HPS3-206ENST00000486530 CTNNBL1Q8WYA6 563 aaPredicted RBP22■■□□□ 1.11
HPS3-206ENST00000486530 RFFLQ8WZ73 363 aa22■■□□□ 1.11
HPS3-206ENST00000486530 TAF4BQ92750 862 aa22■■□□□ 1.11
HPS3-206ENST00000486530 NT5C1BQ96P26 610 aa22■■□□□ 1.11
HPS3-206ENST00000486530 TMEM134Q9H6X4 195 aa22■■□□□ 1.11
HPS3-206ENST00000486530 K7ERI5 159 aa21.99■■□□□ 1.11
HPS3-206ENST00000486530 CELF3Q5SZQ8 465 aaKnown RBP21.99■■□□□ 1.11
HPS3-206ENST00000486530 CST9Q5W186 159 aa21.99■■□□□ 1.11
HPS3-206ENST00000486530 SLFN12LQ6IEE8 588 aa21.99■■□□□ 1.11
HPS3-206ENST00000486530 FAM71AQ8IYT1 594 aa21.99■■□□□ 1.11
HPS3-206ENST00000486530 PPM1KQ8N3J5 372 aa21.99■■□□□ 1.11
HPS3-206ENST00000486530 POP1Q99575 1024 aaKnown RBP21.99■■□□□ 1.11
HPS3-206ENST00000486530 GPR20Q99678 358 aa21.99■■□□□ 1.11
HPS3-206ENST00000486530 TOPORSQ9NS56 1045 aaPredicted RBP21.99■■□□□ 1.11
HPS3-206ENST00000486530 SEPT11Q9NVA2 429 aaKnown RBP21.99■■□□□ 1.11
HPS3-206ENST00000486530 RAB20Q9NX57 234 aa21.99■■□□□ 1.11
HPS3-206ENST00000486530 MAFO75444 373 aaPredicted RBP21.98■■□□□ 1.11
HPS3-206ENST00000486530 LGR5O75473 907 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 KIF4AO95239 1232 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 DLATP10515 647 aaKnown RBP21.98■■□□□ 1.11
HPS3-206ENST00000486530 PLA2G4AP47712 749 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 PSMD6Q15008 389 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 MAP9Q49MG5 647 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 SPRYD7Q5W111 196 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 SLFN11Q7Z7L1 901 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 PSPC1Q8WXF1 523 aaKnown RBP21.98■■□□□ 1.11
HPS3-206ENST00000486530 BBXQ8WY36 941 aaPredicted RBP21.98■■□□□ 1.11
HPS3-206ENST00000486530 SHC3Q92529 594 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 KREMEN1Q96MU8 473 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 PACSIN2Q9UNF0 486 aaPredicted RBP21.98■■□□□ 1.11
HPS3-206ENST00000486530 PLXNA1Q9UIW2 1896 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 ANKRD62A6NC57 917 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 NOP56O00567 594 aaKnown RBP21.98■■□□□ 1.11
HPS3-206ENST00000486530 MAP2K7O14733 419 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 ZC3H11AO75152 810 aaKnown RBP eCLIP21.98■■□□□ 1.11
HPS3-206ENST00000486530 GLIPR1L2Q4G1C9 344 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 WDR78Q5VTH9 848 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 SV2AQ7L0J3 742 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 HDXQ7Z353 690 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 ANKRD23Q86SG2 305 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 EXOC8Q8IYI6 725 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 HELQQ8TDG4 1101 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 TAS1R2Q8TE23 839 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 KAT5Q92993 513 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 AGO2Q9UKV8 859 aaKnown RBP21.98■■□□□ 1.11
HPS3-206ENST00000486530 L1RE1Q9UN81 338 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 PLXNB2O15031 1838 aa21.98■■□□□ 1.11
HPS3-206ENST00000486530 TMCO5BA8MYB1 307 aa21.97■■□□□ 1.11
HPS3-206ENST00000486530 GAS2O43903 313 aaKnown RBP21.97■■□□□ 1.11
HPS3-206ENST00000486530 ITGBL1O95965 494 aaPredicted RBP21.97■■□□□ 1.11
HPS3-206ENST00000486530 LDHAP00338 332 aaKnown RBP21.97■■□□□ 1.11
HPS3-206ENST00000486530 CLDN10P78369 228 aa21.97■■□□□ 1.11
HPS3-206ENST00000486530 CAPSQ13938 189 aa21.97■■□□□ 1.11
HPS3-206ENST00000486530 GPRC5AQ8NFJ5 357 aa21.97■■□□□ 1.11
HPS3-206ENST00000486530 SLC20A1Q8WUM9 679 aa21.97■■□□□ 1.11
HPS3-206ENST00000486530 GLG1Q92896 1179 aa21.97■■□□□ 1.11
HPS3-206ENST00000486530 FAM81BQ96LP2 452 aa21.97■■□□□ 1.11
HPS3-206ENST00000486530 EHD2Q9NZN4 543 aa21.97■■□□□ 1.11
HPS3-206ENST00000486530 TULP1O00294 542 aaPredicted RBP21.96■■□□□ 1.11
HPS3-206ENST00000486530 ADCY3O60266 1144 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 USP8P40818 1118 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 DNA2P51530 1060 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 ENOSF1Q7L5Y1 443 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 PLPPR4Q7Z2D5 763 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 FBXO16Q8IX29 292 aaPredicted RBP21.96■■□□□ 1.11
HPS3-206ENST00000486530 PBKQ96KB5 322 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 CALR3Q96L12 384 aaKnown RBP21.96■■□□□ 1.11
HPS3-206ENST00000486530 SMARCAL1Q9NZC9 954 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 ASB14A6NK59 587 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 HSDL1Q3SXM5 330 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 CCDC62Q6P9F0 684 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 C15orf39Q6ZRI6 1047 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 PEX26Q7Z412 305 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 RPUSD2Q8IZ73 545 aaKnown RBP21.96■■□□□ 1.11
HPS3-206ENST00000486530 MSL3Q8N5Y2 521 aaKnown RBP21.96■■□□□ 1.11
HPS3-206ENST00000486530 EPS8L1Q8TE68 723 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 TCP11Q8WWU5 503 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 MS4A14Q96JA4 679 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 FNBP1Q96RU3 617 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 EFCC1Q9HA90 598 aa21.96■■□□□ 1.11
HPS3-206ENST00000486530 SUCLA2Q9P2R7 463 aaPredicted RBP21.96■■□□□ 1.11
HPS3-206ENST00000486530 NOCTQ9UK39 431 aaKnown RBP21.96■■□□□ 1.11
HPS3-206ENST00000486530 ZBTB48P10074 688 aaPredicted RBP21.95■■□□□ 1.1
HPS3-206ENST00000486530 ABCB4P21439 1286 aa21.95■■□□□ 1.1
HPS3-206ENST00000486530 GCNT1Q02742 428 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms