RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 FAN1Q9Y2M0 1017 aa20.17■□□□□ 0.82
CLDN11-206ENST00000486429 PRG3Q9Y2Y8 225 aaPredicted RBP20.17■□□□□ 0.82
CLDN11-206ENST00000486429 CLIC4Q9Y696 253 aa20.17■□□□□ 0.82
CLDN11-206ENST00000486429 TDRD15B5MCY1 1934 aaKnown RBP20.16■□□□□ 0.82
CLDN11-206ENST00000486429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.16■□□□□ 0.82
CLDN11-206ENST00000486429 C2orf71A6NGG8 1288 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 MBTPS2O43462 519 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 STX6O43752 255 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 ALDH2P05091 517 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 SLC12A3P55017 1021 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 GRIN1Q05586 938 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 DSC1Q08554 894 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 RAD51AP2Q09MP3 1159 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 GRIK3Q13003 919 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 ATF7IP2Q5U623 682 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 EEF1DP3Q658K8 133 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 APBB1IPQ7Z5R6 666 aaPredicted RBP20.16■□□□□ 0.82
CLDN11-206ENST00000486429 COLGALT2Q8IYK4 626 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 MRPL43Q8N983 215 aaKnown RBP20.16■□□□□ 0.82
CLDN11-206ENST00000486429 VN1R2Q8NFZ6 395 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 KLK14Q9P0G3 267 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 ARHGAP28Q9P2N2 729 aa20.16■□□□□ 0.82
CLDN11-206ENST00000486429 NRP1O14786 923 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 NR1I2O75469 434 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 CTSAP10619 480 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 PLCG1P19174 1290 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 OR1G1P47890 313 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 RBM10P98175 930 aaKnown RBP20.15■□□□□ 0.82
CLDN11-206ENST00000486429 COASYQ13057 564 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 PTPAQ15257 358 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 FAM173BQ6P4H8 233 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 SMRP1Q8NCR6 262 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 VN1R3Q9BXE9 311 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 ZSCAN16Q9H4T2 348 aaPredicted RBP20.15■□□□□ 0.82
CLDN11-206ENST00000486429 TMEM134Q9H6X4 195 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 MIOSQ9NXC5 875 aa20.15■□□□□ 0.82
CLDN11-206ENST00000486429 DAXXQ9UER7 740 aaPredicted RBP20.15■□□□□ 0.82
CLDN11-206ENST00000486429 RBM19Q9Y4C8 960 aaKnown RBP20.15■□□□□ 0.82
CLDN11-206ENST00000486429 RECQL4O94761 1208 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 CXCL14O95715 111 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 HSP90AA1P07900 732 aaKnown RBP20.14■□□□□ 0.81
CLDN11-206ENST00000486429 PLS3P13797 630 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 GIT2Q14161 759 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 KARSQ15046 597 aaKnown RBP20.14■□□□□ 0.81
CLDN11-206ENST00000486429 SMAD2Q15796 467 aaKnown RBP20.14■□□□□ 0.81
CLDN11-206ENST00000486429 NT5DC1Q5TFE4 455 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 LLGL2Q6P1M3 1020 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 GPBP1Q86WP2 473 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 TMEM87AQ8NBN3 555 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 GSTCDQ8NEC7 633 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 AUTS2Q8WXX7 1259 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 MRPL4Q9BYD3 311 aaKnown RBP20.14■□□□□ 0.81
CLDN11-206ENST00000486429 MARCH5Q9NX47 278 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 SNTG2Q9NY99 539 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 PRKAG3Q9UGI9 489 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 KCNG1Q9UIX4 513 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 TNFSF13BQ9Y275 285 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 IRAK3Q9Y616 596 aa20.14■□□□□ 0.81
CLDN11-206ENST00000486429 SFI1A8K8P3 1242 aa20.13■□□□□ 0.81
CLDN11-206ENST00000486429 SLC16A4O15374 487 aa20.13■□□□□ 0.81
CLDN11-206ENST00000486429 MARCKSP29966 332 aaPredicted RBP20.13■□□□□ 0.81
CLDN11-206ENST00000486429 SSTR3P32745 418 aaPredicted RBP20.13■□□□□ 0.81
CLDN11-206ENST00000486429 SMTNP53814 917 aa20.13■□□□□ 0.81
CLDN11-206ENST00000486429 CEBPZQ03701 1054 aaKnown RBP20.13■□□□□ 0.81
CLDN11-206ENST00000486429 ZNF568Q3ZCX4 644 aa20.13■□□□□ 0.81
CLDN11-206ENST00000486429 GJD3Q8N144 294 aa20.13■□□□□ 0.81
CLDN11-206ENST00000486429 SPIRE2Q8WWL2 714 aa20.13■□□□□ 0.81
CLDN11-206ENST00000486429 CASP10Q92851 521 aa20.13■□□□□ 0.81
CLDN11-206ENST00000486429 HERC2P3Q9BVR0 1158 aa20.13■□□□□ 0.81
CLDN11-206ENST00000486429 FBXO2Q9UK22 296 aaPredicted RBP20.13■□□□□ 0.81
CLDN11-206ENST00000486429 MYH11P35749 1972 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 CLASP2O75122 1294 aaKnown RBP20.12■□□□□ 0.81
CLDN11-206ENST00000486429 URODP06132 367 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 CACNB1Q02641 598 aaPredicted RBP20.12■□□□□ 0.81
CLDN11-206ENST00000486429 ZP2Q05996 745 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 KCNC3Q14003 757 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 PTPN14Q15678 1187 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 TMEM184AQ6ZMB5 413 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 TAS1R3Q7RTX0 852 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 ADHFE1Q8IWW8 467 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 LRRC15Q8TF66 581 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 RAD54LQ92698 747 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 USP28Q96RU2 1077 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 POP1Q99575 1024 aaKnown RBP20.12■□□□□ 0.81
CLDN11-206ENST00000486429 REEP2Q9BRK0 252 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 CCSER1Q9C0I3 900 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 BLOC1S4Q9NUP1 217 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 LARSQ9P2J5 1176 aaKnown RBP20.12■□□□□ 0.81
CLDN11-206ENST00000486429 ODF2LQ9ULJ1 636 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 GDAQ9Y2T3 454 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 USP15Q9Y4E8 981 aaPredicted RBP20.12■□□□□ 0.81
CLDN11-206ENST00000486429 HCFC2Q9Y5Z7 792 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 MYH15Q9Y2K3 1946 aa20.12■□□□□ 0.81
CLDN11-206ENST00000486429 MUC3AQ02505 3323 aa20.11■□□□□ 0.81
CLDN11-206ENST00000486429 NPHP3-ACAD11A0A0J9YXS1 232 aa20.11■□□□□ 0.81
CLDN11-206ENST00000486429 SOD2P04179 222 aa20.11■□□□□ 0.81
CLDN11-206ENST00000486429 TXLNAP40222 546 aa20.11■□□□□ 0.81
CLDN11-206ENST00000486429 STRN3Q13033 797 aa20.11■□□□□ 0.81
CLDN11-206ENST00000486429 TUSC3Q13454 348 aa20.11■□□□□ 0.81
CLDN11-206ENST00000486429 DHX8Q14562 1220 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms