RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 MALLQ13021 153 aa7.19□□□□□ -1.26
LTN1-206ENST00000486427 CNGB1Q14028 1251 aaPredicted RBP7.19□□□□□ -1.26
LTN1-206ENST00000486427 CSRP2Q16527 193 aa7.19□□□□□ -1.26
LTN1-206ENST00000486427 MIIPQ5JXC2 388 aa7.19□□□□□ -1.26
LTN1-206ENST00000486427 MFSD14BQ5SR56 506 aa7.19□□□□□ -1.26
LTN1-206ENST00000486427 SYDE2Q5VT97 1194 aa7.19□□□□□ -1.26
LTN1-206ENST00000486427 ANKS6Q68DC2 871 aa7.19□□□□□ -1.26
LTN1-206ENST00000486427 C1orf162Q8NEQ5 155 aaPredicted RBP7.19□□□□□ -1.26
LTN1-206ENST00000486427 CACTINQ8WUQ7 758 aaKnown RBP7.19□□□□□ -1.26
LTN1-206ENST00000486427 HOXB13Q92826 284 aaPredicted RBP7.19□□□□□ -1.26
LTN1-206ENST00000486427 GPATCH3Q96I76 525 aa7.19□□□□□ -1.26
LTN1-206ENST00000486427 CDC5LQ99459 802 aaKnown RBP7.19□□□□□ -1.26
LTN1-206ENST00000486427 ZNF703Q9H7S9 590 aaPredicted RBP7.19□□□□□ -1.26
LTN1-206ENST00000486427 AURKAIP1Q9NWT8 199 aaPredicted RBP7.19□□□□□ -1.26
LTN1-206ENST00000486427 XDHP47989 1333 aa7.19□□□□□ -1.26
LTN1-206ENST00000486427 PHF2O75151 1096 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 GASTP01350 101 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 C6P13671 934 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 CRHR1P34998 444 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 MCAMP43121 646 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 PTTG1IPP53801 180 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 ITKQ08881 620 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 IGFL4Q6B9Z1 124 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 PGM2L1Q6PCE3 622 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 DOK3Q7L591 496 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 FAM83AQ86UY5 434 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 TRMT2AQ8IZ69 625 aaKnown RBP7.18□□□□□ -1.26
LTN1-206ENST00000486427 FAM177A1Q8N128 213 aaPredicted RBP7.18□□□□□ -1.26
LTN1-206ENST00000486427 FBXO18Q8NFZ0 1043 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 OR52N2Q8NGI0 321 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 MTMR8Q96EF0 704 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 PLEKHG4BQ96PX9 1271 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 PDCD2LQ9BRP1 358 aa7.18□□□□□ -1.26
LTN1-206ENST00000486427 RBM12Q9NTZ6 932 aaKnown RBP7.18□□□□□ -1.26
LTN1-206ENST00000486427 FZD9O00144 591 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 GABRDO14764 452 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 PCDHGA12O60330 932 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 TACR2P21452 398 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 SLC25A3Q00325 362 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 PTH1RQ03431 593 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 TOB2Q14106 344 aaPredicted RBP7.17□□□□□ -1.26
LTN1-206ENST00000486427 SEPT2Q15019 361 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 CLUL1Q15846 466 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 DCAF17Q5H9S7 520 aaPredicted RBP7.17□□□□□ -1.26
LTN1-206ENST00000486427 NAIF1Q69YI7 327 aaPredicted RBP7.17□□□□□ -1.26
LTN1-206ENST00000486427 GPRIN1Q7Z2K8 1008 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 AMOTL1Q8IY63 956 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 PCDHGA9Q9Y5G4 932 aaKnown RBP7.17□□□□□ -1.26
LTN1-206ENST00000486427 PCDHGA8Q9Y5G5 932 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 PCDHGA7Q9Y5G6 932 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 PCDHGA6Q9Y5G7 932 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 PCDHGA3Q9Y5H0 932 aa7.17□□□□□ -1.26
LTN1-206ENST00000486427 GRXCR1A8MXD5 290 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 GOLGA6L6A8MZA4 724 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 MYBL2P10244 700 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 GSPT1P15170 499 aaKnown RBP7.16□□□□□ -1.26
LTN1-206ENST00000486427 ECHS1P30084 290 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 SREBF1P36956 1147 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 NOMO1Q15155 1222 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 PTPROQ16827 1216 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 PPM1NQ8N819 430 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 OR7D4Q8NG98 312 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 OR2I1PQ8NGU4 316 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 JADE3Q92613 823 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 FAXDC2Q96IV6 333 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 ADI1Q9BV57 179 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 ZNF341Q9BYN7 854 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 CSRNP2Q9H175 543 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 KCNH6Q9H252 994 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 BCO1Q9HAY6 547 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 MKS1Q9NXB0 559 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 WASHC2CQ9Y4E1 1318 aa7.16□□□□□ -1.26
LTN1-206ENST00000486427 LOC105371045A0A1W2PR82 267 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 ANKRD62A6NC57 917 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 NPIPB8E9PQR5 432 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 RBP3P10745 1247 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 PTPN7P35236 360 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 PCBP2Q15366 365 aaKnown RBP eCLIP7.15□□□□□ -1.26
LTN1-206ENST00000486427 VPS72Q15906 364 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 SLC35B2Q8TB61 432 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 TUBD1Q9UJT1 453 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 ZBTB21Q9ULJ3 1066 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 DNM3Q9UQ16 869 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 HDAC5Q9UQL6 1122 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 SIK3Q9Y2K2 1263 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 ATRNL1Q5VV63 1379 aa7.15□□□□□ -1.26
LTN1-206ENST00000486427 ALG1L2C9J202 215 aa7.14□□□□□ -1.27
LTN1-206ENST00000486427 FAM20BO75063 409 aa7.14□□□□□ -1.27
LTN1-206ENST00000486427 HSP90B1P14625 803 aaKnown RBP7.14□□□□□ -1.27
LTN1-206ENST00000486427 SLC6A9P48067 706 aa7.14□□□□□ -1.27
LTN1-206ENST00000486427 MGAT2Q10469 447 aa7.14□□□□□ -1.27
LTN1-206ENST00000486427 LSM12Q3MHD2 195 aaKnown RBP7.14□□□□□ -1.27
LTN1-206ENST00000486427 METTL24Q5JXM2 366 aa7.14□□□□□ -1.27
LTN1-206ENST00000486427 FNDC7Q5VTL7 733 aa7.14□□□□□ -1.27
LTN1-206ENST00000486427 ZNF572Q7Z3I7 529 aaPredicted RBP7.14□□□□□ -1.27
LTN1-206ENST00000486427 PQLC1Q8N2U9 271 aa7.14□□□□□ -1.27
LTN1-206ENST00000486427 FUBP3Q96I24 572 aaKnown RBP eCLIP7.14□□□□□ -1.27
LTN1-206ENST00000486427 LDAHQ9H6V9 325 aa7.14□□□□□ -1.27
LTN1-206ENST00000486427 PARPBPQ9NWS1 579 aa7.14□□□□□ -1.27
LTN1-206ENST00000486427 TNKSO95271 1327 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms