RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 TMEM87AQ8NBN3 555 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 ACSF2Q96CM8 615 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-226ENST00000486210 SPATA32Q96LK8 384 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 KLHL5Q96PQ7 755 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 FDXACB1Q9BRP7 624 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-226ENST00000486210 MMTAG2Q9BU76 263 aaKnown RBP19.52■□□□□ 0.72
MCF2L-226ENST00000486210 INO80BQ9C086 356 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-226ENST00000486210 WRAP73Q9P2S5 460 aaPredicted RBP19.52■□□□□ 0.72
MCF2L-226ENST00000486210 PCDHA7Q9UN72 937 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 INPP5FQ9Y2H2 1132 aa19.52■□□□□ 0.72
MCF2L-226ENST00000486210 IGKV6-21A0A0C4DH24 114 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 TMEM150BA6NC51 233 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 DDX11L8A8MPP1 907 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 NARSO43776 548 aaKnown RBP19.51■□□□□ 0.71
MCF2L-226ENST00000486210 LILRB3O75022 631 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 N4BP1O75113 896 aaKnown RBP19.51■□□□□ 0.71
MCF2L-226ENST00000486210 MED24O75448 989 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 STBD1O95210 358 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 SFPQP23246 707 aaKnown RBP eCLIP19.51■□□□□ 0.71
MCF2L-226ENST00000486210 CYP4A11Q02928 519 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 CTTNQ14247 550 aaKnown RBP19.51■□□□□ 0.71
MCF2L-226ENST00000486210 NOMO2Q5JPE7 1267 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 AXDND1Q5T1B0 1012 aaPredicted RBP19.51■□□□□ 0.71
MCF2L-226ENST00000486210 USP49Q70CQ1 688 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 OTOP3Q7RTS5 596 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 PPFIBP1Q86W92 1011 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 SIX5Q8N196 739 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 KCNG4Q8TDN1 519 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 RSPH1Q8WYR4 309 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 HSD17B14Q9BPX1 270 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 SH2D3AQ9BRG2 576 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 NIFKQ9BYG3 293 aaKnown RBP19.51■□□□□ 0.71
MCF2L-226ENST00000486210 FAM105AQ9NUU6 356 aa19.51■□□□□ 0.71
MCF2L-226ENST00000486210 SLITRK3O94933 977 aa19.5■□□□□ 0.71
MCF2L-226ENST00000486210 CNPP09543 421 aaKnown RBP19.5■□□□□ 0.71
MCF2L-226ENST00000486210 SPATA31C1P0DKV0 1188 aa19.5■□□□□ 0.71
MCF2L-226ENST00000486210 SKIP12755 728 aa19.5■□□□□ 0.71
MCF2L-226ENST00000486210 LONP1P36776 959 aaKnown RBP19.5■□□□□ 0.71
MCF2L-226ENST00000486210 PSMC5P62195 406 aa19.5■□□□□ 0.71
MCF2L-226ENST00000486210 ECM1Q16610 540 aa19.5■□□□□ 0.71
MCF2L-226ENST00000486210 TWF2Q6IBS0 349 aaKnown RBP19.5■□□□□ 0.71
MCF2L-226ENST00000486210 ZNF410Q86VK4 478 aa19.5■□□□□ 0.71
MCF2L-226ENST00000486210 RTP3Q9BQQ7 232 aa19.5■□□□□ 0.71
MCF2L-226ENST00000486210 SCAND2PQ9GZW5 306 aaPredicted RBP19.5■□□□□ 0.71
MCF2L-226ENST00000486210 GBP3Q9H0R5 595 aa19.5■□□□□ 0.71
MCF2L-226ENST00000486210 PIN4Q9Y237 131 aaKnown RBP19.5■□□□□ 0.71
MCF2L-226ENST00000486210 DOCK8Q8NF50 2099 aa19.5■□□□□ 0.71
MCF2L-226ENST00000486210 A0A087WWV3 80 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 CARNS1A5YM72 827 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 ZNF623O75123 536 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 DDHD2O94830 711 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 SSBP05455 408 aaKnown RBP eCLIP19.49■□□□□ 0.71
MCF2L-226ENST00000486210 P4HBP07237 508 aaKnown RBP19.49■□□□□ 0.71
MCF2L-226ENST00000486210 KLRC2P26717 231 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 ME1P48163 572 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 AFF1P51825 1210 aaKnown RBP19.49■□□□□ 0.71
MCF2L-226ENST00000486210 GLB1LQ6UWU2 654 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 C15orf39Q6ZRI6 1047 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 CATSPER3Q86XQ3 398 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 EXOC8Q8IYI6 725 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 SNX29Q8TEQ0 813 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 EPSTI1Q96J88 318 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 LXNQ9BS40 222 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 RAB34Q9BZG1 259 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 SUCLA2Q9P2R7 463 aaPredicted RBP19.49■□□□□ 0.71
MCF2L-226ENST00000486210 FBXL21Q9UKT6 434 aa19.49■□□□□ 0.71
MCF2L-226ENST00000486210 KRBA1A5PL33 1030 aa19.48■□□□□ 0.71
MCF2L-226ENST00000486210 CUTAO60888 179 aa19.48■□□□□ 0.71
MCF2L-226ENST00000486210 CCT6AP40227 531 aaKnown RBP19.48■□□□□ 0.71
MCF2L-226ENST00000486210 QARSP47897 775 aaKnown RBP19.48■□□□□ 0.71
MCF2L-226ENST00000486210 RNASELQ05823 741 aaKnown RBP19.48■□□□□ 0.71
MCF2L-226ENST00000486210 SHC4Q6S5L8 630 aa19.48■□□□□ 0.71
MCF2L-226ENST00000486210 AGMOQ6ZNB7 445 aa19.48■□□□□ 0.71
MCF2L-226ENST00000486210 KSR1Q8IVT5 923 aa19.48■□□□□ 0.71
MCF2L-226ENST00000486210 TPH2Q8IWU9 490 aa19.48■□□□□ 0.71
MCF2L-226ENST00000486210 RSAD2Q8WXG1 361 aa19.48■□□□□ 0.71
MCF2L-226ENST00000486210 AK8Q96MA6 479 aa19.48■□□□□ 0.71
MCF2L-226ENST00000486210 POLR3CQ9BUI4 534 aaPredicted RBP19.48■□□□□ 0.71
MCF2L-226ENST00000486210 EMILIN2Q9BXX0 1053 aa19.48■□□□□ 0.71
MCF2L-226ENST00000486210 FANCMQ8IYD8 2048 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 SPDYE4A6NLX3 237 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 ZBTB39O15060 712 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 RPA1P27694 616 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 KRT79Q5XKE5 535 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 CATSPER4Q7RTX7 472 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 RHPN2Q8IUC4 686 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 ERMNQ8TAM6 284 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 SLC7A3Q8WY07 619 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 NLRP4Q96MN2 994 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 PNMA5Q96PV4 448 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 TUFT1Q9NNX1 390 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 IGSF9Q9P2J2 1179 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 PPME1Q9Y570 386 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 TCHHQ07283 1943 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 CACNA1AO00555 2505 aa19.47■□□□□ 0.71
MCF2L-226ENST00000486210 MAFO75444 373 aaPredicted RBP19.46■□□□□ 0.71
MCF2L-226ENST00000486210 CFHP08603 1231 aa19.46■□□□□ 0.71
MCF2L-226ENST00000486210 RAB27AP51159 221 aa19.46■□□□□ 0.71
MCF2L-226ENST00000486210 ZRSR1Q15695 479 aaKnown RBP19.46■□□□□ 0.71
MCF2L-226ENST00000486210 HAUS3Q68CZ6 603 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms