RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 PRPF31Q8WWY3 499 aaKnown RBP6.22□□□□□ -1.41
COPS3-208ENST00000486032 PSPC1Q8WXF1 523 aaKnown RBP6.22□□□□□ -1.41
COPS3-208ENST00000486032 TRIM43Q96BQ3 446 aaPredicted RBP6.22□□□□□ -1.41
COPS3-208ENST00000486032 VWCEQ96DN2 955 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 CCDC34Q96HJ3 373 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 SCLYQ96I15 445 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 IFT74Q96LB3 600 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 CTAGE1Q96RT6 745 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 CEP89Q96ST8 783 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 OSMRQ99650 979 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 REEP2Q9BRK0 252 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 FDXACB1Q9BRP7 624 aaPredicted RBP6.22□□□□□ -1.41
COPS3-208ENST00000486032 KIFC3Q9BVG8 833 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 OSBPL7Q9BZF2 842 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 LRRC27Q9C0I9 530 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 TNMDQ9H2S6 317 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 PRO3102Q9H379 93 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 HIPK3Q9H422 1215 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 CUEDC2Q9H467 287 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 DHX33Q9H6R0 707 aaKnown RBP6.22□□□□□ -1.41
COPS3-208ENST00000486032 PDLIM7Q9NR12 457 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 PANK4Q9NVE7 773 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 PRKAG2Q9UGJ0 569 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 TRPV2Q9Y5S1 764 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 CDY2AQ9Y6F7 541 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 ARID2Q68CP9 1835 aa6.22□□□□□ -1.41
COPS3-208ENST00000486032 FAM237AA0A1B0GTK4 181 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 SMIM35A0A1B0GVV1 85 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 MBLAC1A4D2B0 266 aaPredicted RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 INO80B-WBP1J3KQ70 363 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 K7ENM7 598 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 BIN1O00499 593 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 SLC16A4O15374 487 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 CSDE1O75534 798 aaKnown RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 MBD3O95983 291 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 CD4P01730 458 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 GHRP10912 638 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 CKBP12277 381 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 RAG1P15918 1043 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 RHOQP17081 205 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 HOXB4P17483 251 aaPredicted RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 GLRA2P23416 452 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 CLCN1P35523 988 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 MRPS6P82932 125 aaKnown RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 LAMTOR4Q0VGL1 99 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 BFSP2Q13515 415 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 CAPSQ13938 189 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 LRP8Q14114 963 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 GIT2Q14161 759 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 TFDP1Q14186 410 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 POSTNQ15063 836 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 TCTN1Q2MV58 587 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 HERC4Q5GLZ8 1057 aaPredicted RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 ODR4Q5SWX8 454 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 L1TD1Q5T7N2 865 aaKnown RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 ZNF618Q5T7W0 954 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 CAVIN1Q6NZI2 390 aaKnown RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 TAF2Q6P1X5 1199 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 ANKRD33Q7Z3H0 272 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 DEFB128Q7Z7B8 93 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 SFR1Q86XK3 245 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 KIAA0319LQ8IZA0 1049 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 RNF149Q8NC42 400 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 BSNDQ8WZ55 320 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 HPS3Q969F9 1004 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 CCDC47Q96A33 483 aaKnown RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 DRC1Q96MC2 740 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 C7orf25Q9BPX7 421 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 SEZ6LQ9BYH1 1024 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 CELF4Q9BZC1 486 aaKnown RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 TRIM9Q9C026 710 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 INO80BQ9C086 356 aaPredicted RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 NUP62CLQ9H1M0 184 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 MAGEF1Q9HAY2 307 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 KMT5AQ9NQR1 393 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 EXOC1Q9NV70 894 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 KBTBD4Q9NVX7 518 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 USP25Q9UHP3 1055 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 HOOK1Q9UJC3 728 aaKnown RBP6.21□□□□□ -1.42
COPS3-208ENST00000486032 PPME1Q9Y570 386 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 COL4A3BPQ9Y5P4 624 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 SCN5AQ14524 2016 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 LOXHD1Q8IVV2 1947 aa6.21□□□□□ -1.42
COPS3-208ENST00000486032 IGKV6-21A0A0C4DH24 114 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 ASAP2O43150 1006 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 PAX4O43316 350 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 GAS2O43903 313 aaKnown RBP6.2□□□□□ -1.42
COPS3-208ENST00000486032 TRAK2O60296 914 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 GCNT3O95395 438 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 CHRNA1P02708 482 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 RPN1P04843 607 aaKnown RBP6.2□□□□□ -1.42
COPS3-208ENST00000486032 PLS3P13797 630 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 SELPP16109 830 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 PTMSP20962 102 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 GUCY2CP25092 1073 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 NMT1P30419 496 aaKnown RBP6.2□□□□□ -1.42
COPS3-208ENST00000486032 HOXC8P31273 242 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 ARL2P36404 184 aa6.2□□□□□ -1.42
COPS3-208ENST00000486032 MAGEA10P43363 369 aaPredicted RBP6.2□□□□□ -1.42
COPS3-208ENST00000486032 GPC3P51654 580 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms