RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SRGAP2BP0DMP2 458 aa19.45■□□□□ 0.7
COL6A1-204ENST00000486023 DMP1Q13316 513 aaPredicted RBP19.45■□□□□ 0.7
COL6A1-204ENST00000486023 FAM187BQ17R55 369 aa19.45■□□□□ 0.7
COL6A1-204ENST00000486023 ATF7IP2Q5U623 682 aa19.45■□□□□ 0.7
COL6A1-204ENST00000486023 EEF1DP3Q658K8 133 aa19.45■□□□□ 0.7
COL6A1-204ENST00000486023 C1orf186Q6ZWK4 172 aa19.45■□□□□ 0.7
COL6A1-204ENST00000486023 MSLNLQ96KJ4 702 aa19.45■□□□□ 0.7
COL6A1-204ENST00000486023 TMEM175Q9BSA9 504 aa19.45■□□□□ 0.7
COL6A1-204ENST00000486023 CCDC113Q9H0I3 377 aa19.45■□□□□ 0.7
COL6A1-204ENST00000486023 ZBP1Q9H171 429 aa19.45■□□□□ 0.7
COL6A1-204ENST00000486023 EPHX3Q9H6B9 360 aa19.45■□□□□ 0.7
COL6A1-204ENST00000486023 F8W810 466 aa19.44■□□□□ 0.7
COL6A1-204ENST00000486023 SLC16A4O15374 487 aa19.44■□□□□ 0.7
COL6A1-204ENST00000486023 MARCKSP29966 332 aaPredicted RBP19.44■□□□□ 0.7
COL6A1-204ENST00000486023 SMAD2Q15796 467 aaKnown RBP19.44■□□□□ 0.7
COL6A1-204ENST00000486023 SPECC1Q5M775 1068 aa19.44■□□□□ 0.7
COL6A1-204ENST00000486023 NT5DC1Q5TFE4 455 aa19.44■□□□□ 0.7
COL6A1-204ENST00000486023 FOXD4L5Q5VV16 416 aaPredicted RBP19.44■□□□□ 0.7
COL6A1-204ENST00000486023 ZBTB33Q86T24 672 aa19.44■□□□□ 0.7
COL6A1-204ENST00000486023 COLGALT2Q8IYK4 626 aa19.44■□□□□ 0.7
COL6A1-204ENST00000486023 DAW1Q8N136 415 aa19.44■□□□□ 0.7
COL6A1-204ENST00000486023 SYT2Q8N9I0 419 aaPredicted RBP19.44■□□□□ 0.7
COL6A1-204ENST00000486023 FOXD4L4Q8WXT5 416 aaPredicted RBP19.44■□□□□ 0.7
COL6A1-204ENST00000486023 KHSRPQ92945 711 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL6A1-204ENST00000486023 INTS4Q96HW7 963 aaKnown RBP19.44■□□□□ 0.7
COL6A1-204ENST00000486023 VN1R3Q9BXE9 311 aa19.44■□□□□ 0.7
COL6A1-204ENST00000486023 CACNG4Q9UBN1 327 aa19.44■□□□□ 0.7
COL6A1-204ENST00000486023 CARNS1A5YM72 827 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 CLASP2O75122 1294 aaKnown RBP19.43■□□□□ 0.7
COL6A1-204ENST00000486023 BMP15O95972 392 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 HSP90AA1P07900 732 aaKnown RBP19.43■□□□□ 0.7
COL6A1-204ENST00000486023 CTSAP10619 480 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 OSTNP61366 133 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 KARSQ15046 597 aaKnown RBP19.43■□□□□ 0.7
COL6A1-204ENST00000486023 HYIQ5T013 277 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 ANKRD54Q6NXT1 300 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 TAS1R1Q7RTX1 841 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 SPRYD3Q8NCJ5 442 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 AK8Q96MA6 479 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 TCHPQ9BT92 498 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 COLEC11Q9BWP8 271 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 ZHX3Q9H4I2 956 aa19.43■□□□□ 0.7
COL6A1-204ENST00000486023 USP15Q9Y4E8 981 aaPredicted RBP19.43■□□□□ 0.7
COL6A1-204ENST00000486023 SPDYE4A6NLX3 237 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 RECQL4O94761 1208 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 KRT18P05783 430 aaKnown RBP19.42■□□□□ 0.7
COL6A1-204ENST00000486023 HARSP12081 509 aaKnown RBP19.42■□□□□ 0.7
COL6A1-204ENST00000486023 SLC12A3P55017 1021 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 ZP2Q05996 745 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 COASYQ13057 564 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 RESTQ13127 1097 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 HSCBQ8IWL3 235 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 ADHFE1Q8IWW8 467 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 CXCL16Q9H2A7 254 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 MARCH5Q9NX47 278 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 HCFC2Q9Y5Z7 792 aa19.42■□□□□ 0.7
COL6A1-204ENST00000486023 ATG2AQ2TAZ0 1938 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 FSD2A1L4K1 749 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 CASTOR2A6NHX0 329 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 STX6O43752 255 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 TADA2AO75478 443 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 MYBP10242 640 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 GUCY2CP25092 1073 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 KLRC2P26717 231 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 LONP1P36776 959 aaKnown RBP19.41■□□□□ 0.7
COL6A1-204ENST00000486023 MAPK7Q13164 816 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 TMEM119Q4V9L6 283 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 KIAA1841Q6NSI8 718 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 GPBP1Q86WP2 473 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 C12orf76Q8N812 135 aaPredicted RBP19.41■□□□□ 0.7
COL6A1-204ENST00000486023 SMRP1Q8NCR6 262 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 GSTCDQ8NEC7 633 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 CASP10Q92851 521 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 RPGRIP1Q96KN7 1286 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 B3GALT6Q96L58 329 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 CLIC6Q96NY7 704 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 TARS2Q9BW92 718 aaKnown RBP19.41■□□□□ 0.7
COL6A1-204ENST00000486023 MRPL4Q9BYD3 311 aaKnown RBP19.41■□□□□ 0.7
COL6A1-204ENST00000486023 MRPL17Q9NRX2 175 aaKnown RBP19.41■□□□□ 0.7
COL6A1-204ENST00000486023 MTMR6Q9Y217 621 aa19.41■□□□□ 0.7
COL6A1-204ENST00000486023 RBM19Q9Y4C8 960 aaKnown RBP19.41■□□□□ 0.7
COL6A1-204ENST00000486023 PLS3P13797 630 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 EPCAMP16422 314 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 PLCG1P19174 1290 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 SP100P23497 879 aaPredicted RBP19.4■□□□□ 0.7
COL6A1-204ENST00000486023 MATR3P43243 847 aaKnown RBP eCLIP19.4■□□□□ 0.7
COL6A1-204ENST00000486023 SMTNP53814 917 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 DSC1Q08554 894 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 GRIK3Q13003 919 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 STRN3Q13033 797 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 GIT2Q14161 759 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 MCM6Q14566 821 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 PTPN14Q15678 1187 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 DCAF4L1Q3SXM0 396 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 KANK3Q6NY19 840 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 APBB1IPQ7Z5R6 666 aaPredicted RBP19.4■□□□□ 0.7
COL6A1-204ENST00000486023 HASPINQ8TF76 798 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 EPSTI1Q96J88 318 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 ACO2Q99798 780 aaKnown RBP19.4■□□□□ 0.7
COL6A1-204ENST00000486023 TIPINQ9BVW5 301 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms