RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 POTEMA6NI47 508 aa22.57■■□□□ 1.2
CHRD-215ENST00000485883 NEMFO60524 1076 aa22.57■■□□□ 1.2
CHRD-215ENST00000485883 N4BP1O75113 896 aaKnown RBP22.57■■□□□ 1.2
CHRD-215ENST00000485883 GLUD2P49448 558 aa22.57■■□□□ 1.2
CHRD-215ENST00000485883 NCBP1Q09161 790 aaKnown RBP22.57■■□□□ 1.2
CHRD-215ENST00000485883 C15orf39Q6ZRI6 1047 aa22.57■■□□□ 1.2
CHRD-215ENST00000485883 OTOP3Q7RTS5 596 aa22.57■■□□□ 1.2
CHRD-215ENST00000485883 TRIM6Q9C030 488 aaPredicted RBP22.57■■□□□ 1.2
CHRD-215ENST00000485883 POLR3FQ9H1D9 316 aaPredicted RBP22.57■■□□□ 1.2
CHRD-215ENST00000485883 KLK14Q9P0G3 267 aa22.57■■□□□ 1.2
CHRD-215ENST00000485883 CACNG4Q9UBN1 327 aa22.57■■□□□ 1.2
CHRD-215ENST00000485883 GIT1Q9Y2X7 761 aa22.57■■□□□ 1.2
CHRD-215ENST00000485883 CCDC195A0A1B0GUA6 201 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 GFRA3O60609 400 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 USO1O60763 962 aaKnown RBP22.56■■□□□ 1.2
CHRD-215ENST00000485883 RFPL2O75678 378 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 NPTXRO95502 500 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 ADH1AP07327 375 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 SPATA31D3P0C874 917 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 DSG1Q02413 1049 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 ST3GAL1Q11201 340 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 ASTLQ6HA08 431 aaPredicted RBP22.56■■□□□ 1.2
CHRD-215ENST00000485883 SPATA31D4Q6ZUB0 917 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 NFKBIZQ9BYH8 718 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 GPR62Q9BZJ7 368 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 KCNK12Q9HB15 430 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 RXFP1Q9HBX9 757 aa22.56■■□□□ 1.2
CHRD-215ENST00000485883 GLUD1P00367 558 aa22.55■■□□□ 1.2
CHRD-215ENST00000485883 SPATA31C1P0DKV0 1188 aa22.55■■□□□ 1.2
CHRD-215ENST00000485883 NUBP1P53384 320 aa22.55■■□□□ 1.2
CHRD-215ENST00000485883 CWF19L1Q69YN2 538 aaKnown RBP22.55■■□□□ 1.2
CHRD-215ENST00000485883 CMASQ8NFW8 434 aaPredicted RBP22.55■■□□□ 1.2
CHRD-215ENST00000485883 CCDC43Q96MW1 224 aaKnown RBP22.55■■□□□ 1.2
CHRD-215ENST00000485883 MFSD1Q9H3U5 465 aa22.55■■□□□ 1.2
CHRD-215ENST00000485883 CHST7Q9NS84 486 aa22.55■■□□□ 1.2
CHRD-215ENST00000485883 SSX2IPQ9Y2D8 614 aa22.55■■□□□ 1.2
CHRD-215ENST00000485883 PLXNA3P51805 1871 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 A0A1B0GUA9 196 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 ATP2B1P20020 1258 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 TDGQ13569 410 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 FUT10Q6P4F1 479 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 PALB2Q86YC2 1186 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 GLYCTKQ8IVS8 523 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 FLCNQ8NFG4 579 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 RSAD2Q8WXG1 361 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 COLEC11Q9BWP8 271 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 IRF2BPLQ9H1B7 796 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 PARP2Q9UGN5 583 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 CFAP54Q96N23 3096 aa22.54■■□□□ 1.2
CHRD-215ENST00000485883 DMDP11532 3685 aa22.53■■□□□ 1.2
CHRD-215ENST00000485883 LRRIQ4A6NIV6 560 aa22.53■■□□□ 1.2
CHRD-215ENST00000485883 TTLL13PA6NNM8 815 aa22.53■■□□□ 1.2
CHRD-215ENST00000485883 NARSO43776 548 aaKnown RBP22.53■■□□□ 1.2
CHRD-215ENST00000485883 ST18O60284 1047 aa22.53■■□□□ 1.2
CHRD-215ENST00000485883 NPR3P17342 541 aa22.53■■□□□ 1.2
CHRD-215ENST00000485883 RPL17P18621 184 aaKnown RBP22.53■■□□□ 1.2
CHRD-215ENST00000485883 SLC27A1Q6PCB7 646 aa22.53■■□□□ 1.2
CHRD-215ENST00000485883 CATSPER3Q86XQ3 398 aa22.53■■□□□ 1.2
CHRD-215ENST00000485883 ZNF707Q96C28 371 aaPredicted RBP22.53■■□□□ 1.2
CHRD-215ENST00000485883 PAAF1Q9BRP4 392 aa22.53■■□□□ 1.2
CHRD-215ENST00000485883 WDR6Q9NNW5 1121 aaKnown RBP22.53■■□□□ 1.2
CHRD-215ENST00000485883 DUSP12Q9UNI6 340 aa22.53■■□□□ 1.2
CHRD-215ENST00000485883 PI15O43692 258 aa22.52■■□□□ 1.2
CHRD-215ENST00000485883 MED24O75448 989 aa22.52■■□□□ 1.2
CHRD-215ENST00000485883 NR1I2O75469 434 aa22.52■■□□□ 1.2
CHRD-215ENST00000485883 XRCC6P12956 609 aaKnown RBP eCLIP22.52■■□□□ 1.2
CHRD-215ENST00000485883 MCM7P33993 719 aa22.52■■□□□ 1.2
CHRD-215ENST00000485883 CLCN5P51795 746 aa22.52■■□□□ 1.2
CHRD-215ENST00000485883 GUCY1B3Q02153 619 aa22.52■■□□□ 1.2
CHRD-215ENST00000485883 HACE1Q8IYU2 909 aa22.52■■□□□ 1.2
CHRD-215ENST00000485883 MYADMQ96S97 322 aa22.52■■□□□ 1.2
CHRD-215ENST00000485883 CXCL16Q9H2A7 254 aa22.52■■□□□ 1.2
CHRD-215ENST00000485883 USP20Q9Y2K6 914 aa22.52■■□□□ 1.2
CHRD-215ENST00000485883 TDRD15B5MCY1 1934 aaKnown RBP22.52■■□□□ 1.2
CHRD-215ENST00000485883 TGM5O43548 720 aa22.51■■□□□ 1.19
CHRD-215ENST00000485883 GBP2P32456 591 aaPredicted RBP22.51■■□□□ 1.19
CHRD-215ENST00000485883 GRIK3Q13003 919 aa22.51■■□□□ 1.19
CHRD-215ENST00000485883 TRIM29Q14134 588 aa22.51■■□□□ 1.19
CHRD-215ENST00000485883 POTEGQ6S5H5 508 aa22.51■■□□□ 1.19
CHRD-215ENST00000485883 RIN2Q8WYP3 895 aaPredicted RBP22.51■■□□□ 1.19
CHRD-215ENST00000485883 BSNDQ8WZ55 320 aa22.51■■□□□ 1.19
CHRD-215ENST00000485883 SMG7Q92540 1137 aaKnown RBP22.51■■□□□ 1.19
CHRD-215ENST00000485883 ADAM28Q9UKQ2 775 aa22.51■■□□□ 1.19
CHRD-215ENST00000485883 ZFHX2Q9C0A1 2572 aaPredicted RBP22.51■■□□□ 1.19
CHRD-215ENST00000485883 CLUHO75153 1309 aa22.51■■□□□ 1.19
CHRD-215ENST00000485883 USP41Q3LFD5 358 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 PPP4R3CPQ6ZMV5 832 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 ASCL5Q7RTU5 278 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 SIX5Q8N196 739 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 HASPINQ8TF76 798 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 RHOBTB2Q9BYZ6 727 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 NT5C3AQ9H0P0 336 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 FZD8Q9H461 694 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 FBXL21Q9UKT6 434 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 LIMCH1Q9UPQ0 1083 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 VPS13AQ96RL7 3174 aa22.5■■□□□ 1.19
CHRD-215ENST00000485883 EDN1P05305 212 aa22.49■■□□□ 1.19
CHRD-215ENST00000485883 RTP2Q5QGT7 225 aa22.49■■□□□ 1.19
CHRD-215ENST00000485883 CDCA2Q69YH5 1023 aaPredicted RBP22.49■■□□□ 1.19
CHRD-215ENST00000485883 LILRA6Q6PI73 481 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms