RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 PPIP5K2O43314 1243 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 CYTH3O43739 400 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 RTN2O75298 545 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM228BP0C875 321 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 CYP2D6P10635 497 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 ALADP13716 330 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 GNA11P29992 359 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 GBP1P32455 592 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 HPDP32754 393 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 CTNNA1P35221 906 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 GYG1P46976 350 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 NOVP48745 357 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 SIK1P57059 783 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 MECOMQ03112 1051 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 COASYQ13057 564 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 PDIA5Q14554 519 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 SF3B3Q15393 1217 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 CLUL1Q15846 466 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 SKIDA1Q1XH10 827 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 TMEM266Q2M3C6 531 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 SPRED3Q2MJR0 410 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 EDRF1Q3B7T1 1238 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM47AQ5JRC9 791 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 ERMARDQ5T6L9 678 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 C12orf60Q5U649 245 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 TTC39BQ5VTQ0 682 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 MSL1Q68DK7 614 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 GDF6Q6KF10 455 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 WFDC8Q8IUA0 241 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 KRTAP1-3Q8IUG1 177 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 MYOCDQ8IZQ8 938 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 SYCE1Q8N0S2 351 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 ANKRD13CQ8N6S4 541 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 CCDC197Q8NCU1 140 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 TTC16Q8NEE8 873 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 ATP8B4Q8TF62 1192 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 ATXN2LQ8WWM7 1075 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 TBC1D5Q92609 795 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 N4BP2L2Q92802 583 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 DDX17Q92841 729 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 HPS3Q969F9 1004 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 PLD4Q96BZ4 506 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 HVCN1Q96D96 273 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 DNAJC19Q96DA6 116 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 CHMP6Q96FZ7 201 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 PGM2Q96G03 612 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 ZNF317Q96PQ6 595 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 XPO6Q96QU8 1125 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 PSMD1Q99460 953 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 TMEM109Q9BVC6 243 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 MOV10L1Q9BXT6 1211 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 RAB34Q9BZG1 259 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 EBF2Q9HAK2 575 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 C6orf50Q9HD87 102 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 SLC39A2Q9NP94 309 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 HAUS2Q9NVX0 235 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 FRRS1LQ9P0K9 344 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 SUCLA2Q9P2R7 463 aaPredicted RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 CNOT8Q9UFF9 292 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 ABCF2Q9UG63 623 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 DIS3Q9Y2L1 958 aaKnown RBP5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 DAAM1Q9Y4D1 1078 aa5.09□□□□□ -1.59
SMARCC1-206ENST00000485737 XIRP1Q702N8 1843 aaKnown RBP5.09□□□□□ -1.6
SMARCC1-206ENST00000485737 COL14A1Q05707 1796 aaKnown RBP5.09□□□□□ -1.6
SMARCC1-206ENST00000485737 COL5A3P25940 1745 aaPredicted RBP5.09□□□□□ -1.6
SMARCC1-206ENST00000485737 AFF2P51816 1311 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 KDM3AQ9Y4C1 1321 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 IRS2Q9Y4H2 1338 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 A0A1B0GUA9 196 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CCDC189A1A4V9 331 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CCT8L1PA6NM43 557 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 F8W031 263 aaPredicted RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 KCNK3O14649 394 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 LIN7AO14910 233 aaPredicted RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 SLC16A3O15427 465 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 SART1O43290 800 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CCNT1O60563 726 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 FLOT1O75955 427 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 TRIM37O94972 964 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 ATP6V1G2O95670 118 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 OAS1P00973 400 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 ELNP15502 786 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 MMP13P45452 471 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 NAPAP54920 295 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 DRG2P55039 364 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 JAM2P57087 298 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 PTENP60484 403 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 POLR2FP61218 127 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 MAGOHP61326 146 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 ELF3P78545 371 aaPredicted RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 TFAP4Q01664 338 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 SATB1Q01826 763 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 KLHL30Q0D2K2 578 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 RAPGEF1Q13905 1077 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 HLTFQ14527 1009 aaKnown RBP eCLIP5.08□□□□□ -1.61e-9■■□□□ 11.6
SMARCC1-206ENST00000485737 TRADDQ15628 312 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CALCRLQ16602 461 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 KIAA0753Q2KHM9 967 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms