RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 TMX1Q9H3N1 280 aa10.37□□□□□ -0.75
CTSA-208ENST00000485627 XPNPEP3Q9NQH7 507 aa10.37□□□□□ -0.75
CTSA-208ENST00000485627 ANKFY1Q9P2R3 1169 aa10.37□□□□□ -0.75
CTSA-208ENST00000485627 AGO2Q9UKV8 859 aaKnown RBP10.37□□□□□ -0.75
CTSA-208ENST00000485627 SMIM35A0A1B0GVV1 85 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 HAS3O00219 553 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 ACKR2O00590 384 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 P4HA2O15460 535 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 TOM1L1O75674 476 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 PGK1P00558 417 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 VTNP04004 478 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 GJB1P08034 283 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 TRIM49P0CI25 452 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 TRIM49CP0CI26 452 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 HARSP12081 509 aaKnown RBP10.36□□□□□ -0.75
CTSA-208ENST00000485627 KCNJ6P48051 423 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 PURAQ00577 322 aaKnown RBP10.36□□□□□ -0.75
CTSA-208ENST00000485627 MYL7Q01449 175 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 ENPEPQ07075 957 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 NCBP1Q09161 790 aaKnown RBP10.36□□□□□ -0.75
CTSA-208ENST00000485627 KCNMA1Q12791 1236 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 TRIM32Q13049 653 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 PRPF4BQ13523 1007 aaKnown RBP10.36□□□□□ -0.75
CTSA-208ENST00000485627 NOLC1Q14978 699 aaKnown RBP eCLIP10.36□□□□□ -0.75
CTSA-208ENST00000485627 ATF7IP2Q5U623 682 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 ZNF410Q86VK4 478 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 CBWD2Q8IUF1 395 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 LINC01465Q8N7H1 131 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 TMC2Q8TDI7 906 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 PXYLP1Q8TE99 480 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 LMBR1Q8WVP7 490 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 CCDC127Q96BQ5 260 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 ZBTB10Q96DT7 871 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 ZNF668Q96K58 619 aaPredicted RBP10.36□□□□□ -0.75
CTSA-208ENST00000485627 PPP1R16BQ96T49 567 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 ACO2Q99798 780 aaKnown RBP10.36□□□□□ -0.75
CTSA-208ENST00000485627 GCOM2Q9BZD3 368 aaPredicted RBP10.36□□□□□ -0.75
CTSA-208ENST00000485627 CCDC113Q9H0I3 377 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 FAM49AQ9H0Q0 323 aaPredicted RBP10.36□□□□□ -0.75
CTSA-208ENST00000485627 UPF3AQ9H1J1 476 aaKnown RBP10.36□□□□□ -0.75
CTSA-208ENST00000485627 PLCB1Q9NQ66 1216 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 GCNT4Q9P109 453 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 CEP72Q9P209 647 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 STYXL1Q9Y6J8 313 aa10.36□□□□□ -0.75
CTSA-208ENST00000485627 A0A087WZ62 844 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 A0A0B4J269 797 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 MSCO60682 206 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 ERLIN2O94905 339 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 MXI1P50539 228 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 NLRP11P59045 1033 aaKnown RBP10.35□□□□□ -0.75
CTSA-208ENST00000485627 POLR2FP61218 127 aaKnown RBP10.35□□□□□ -0.75
CTSA-208ENST00000485627 IRX5P78411 483 aaPredicted RBP10.35□□□□□ -0.75
CTSA-208ENST00000485627 MBTD1Q05BQ5 628 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 CYP24A1Q07973 514 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 MARCH8Q5T0T0 291 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 MPZL3Q6UWV2 235 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 RRAGAQ7L523 313 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 APBB1IPQ7Z5R6 666 aaPredicted RBP10.35□□□□□ -0.75
CTSA-208ENST00000485627 SRGAP1Q7Z6B7 1085 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 ZBTB33Q86T24 672 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 RNF180Q86T96 592 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 KIAA0319LQ8IZA0 1049 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 ZNF710Q8N1W2 664 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 PCSK9Q8NBP7 692 aaKnown RBP10.35□□□□□ -0.75
CTSA-208ENST00000485627 SLAIN1Q8ND83 568 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 PARD3BQ8TEW8 1205 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 ZBTB45Q96K62 511 aaPredicted RBP10.35□□□□□ -0.75
CTSA-208ENST00000485627 PRIMPOLQ96LW4 560 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 MFSD14AQ96MC6 490 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 FBXL18Q96ME1 805 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 SPAG5Q96R06 1193 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 DNAJC7Q99615 494 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 FDXACB1Q9BRP7 624 aaPredicted RBP10.35□□□□□ -0.75
CTSA-208ENST00000485627 TTYH3Q9C0H2 523 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 PRO3102Q9H379 93 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 FZD8Q9H461 694 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 AGPAT5Q9NUQ2 364 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 DAAM1Q9Y4D1 1078 aa10.35□□□□□ -0.75
CTSA-208ENST00000485627 MBLAC1A4D2B0 266 aaPredicted RBP10.34□□□□□ -0.75
CTSA-208ENST00000485627 MYADML2A6NDP7 307 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 M0QZ92 97 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 OGTO15294 1046 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 ZSCAN12O43309 604 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 IPO7O95373 1038 aaKnown RBP10.34□□□□□ -0.75
CTSA-208ENST00000485627 ADRB2P07550 413 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 DLATP10515 647 aaKnown RBP10.34□□□□□ -0.75
CTSA-208ENST00000485627 SLC9A1P19634 815 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 PON1P27169 355 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 CCND3P30281 292 aaPredicted RBP10.34□□□□□ -0.75
CTSA-208ENST00000485627 GTF2H1P32780 548 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 CYLC1P35663 651 aaPredicted RBP10.34□□□□□ -0.75
CTSA-208ENST00000485627 ACOT2P49753 483 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 GPC3P51654 580 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 SURF1Q15526 300 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 FAM187BQ17R55 369 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 ZNF568Q3ZCX4 644 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 CBWD6Q4V339 395 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 CBWD3Q5JTY5 395 aa10.34□□□□□ -0.75
CTSA-208ENST00000485627 DNTTIP2Q5QJE6 756 aaKnown RBP10.34□□□□□ -0.75
CTSA-208ENST00000485627 CBWD5Q5RIA9 395 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms