RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 XRCC6P12956 609 aaKnown RBP eCLIP21.34■■□□□ 1.01
COL27A1-205ENST00000485397 MCM7P33993 719 aa21.34■■□□□ 1.01
COL27A1-205ENST00000485397 GLUD2P49448 558 aa21.34■■□□□ 1.01
COL27A1-205ENST00000485397 OTOP3Q7RTS5 596 aa21.34■■□□□ 1.01
COL27A1-205ENST00000485397 B3GALT6Q96L58 329 aa21.34■■□□□ 1.01
COL27A1-205ENST00000485397 COLEC11Q9BWP8 271 aa21.34■■□□□ 1.01
COL27A1-205ENST00000485397 RXFP1Q9HBX9 757 aa21.34■■□□□ 1.01
COL27A1-205ENST00000485397 SSX2IPQ9Y2D8 614 aa21.34■■□□□ 1.01
COL27A1-205ENST00000485397 A0A1B0GUA9 196 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 LRRIQ4A6NIV6 560 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 MED24O75448 989 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 NR1I2O75469 434 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 ADH1AP07327 375 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 DSG1Q02413 1049 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 SLC27A1Q6PCB7 646 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 C15orf39Q6ZRI6 1047 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 CATSPER3Q86XQ3 398 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 HACE1Q8IYU2 909 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 TMEM105Q8N8V8 129 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 RABGGTAQ92696 567 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 GPR62Q9BZJ7 368 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 PARP2Q9UGN5 583 aa21.33■■□□□ 1.01
COL27A1-205ENST00000485397 DENND4AQ7Z401 1863 aa21.32■■□□□ 1
COL27A1-205ENST00000485397 H0Y858 1186 aa21.32■■□□□ 1
COL27A1-205ENST00000485397 SEC24BO95487 1268 aa21.32■■□□□ 1
COL27A1-205ENST00000485397 GLUD1P00367 558 aa21.32■■□□□ 1
COL27A1-205ENST00000485397 SPATA31D3P0C874 917 aa21.32■■□□□ 1
COL27A1-205ENST00000485397 SPATA31D4Q6ZUB0 917 aa21.32■■□□□ 1
COL27A1-205ENST00000485397 CMASQ8NFW8 434 aaPredicted RBP21.32■■□□□ 1
COL27A1-205ENST00000485397 ATOH1Q92858 354 aaPredicted RBP21.32■■□□□ 1
COL27A1-205ENST00000485397 TUFT1Q9NNX1 390 aa21.32■■□□□ 1
COL27A1-205ENST00000485397 CHST7Q9NS84 486 aa21.32■■□□□ 1
COL27A1-205ENST00000485397 CACNG4Q9UBN1 327 aa21.32■■□□□ 1
COL27A1-205ENST00000485397 CCDC195A0A1B0GUA6 201 aa21.31■■□□□ 1
COL27A1-205ENST00000485397 TTLL13PA6NNM8 815 aa21.31■■□□□ 1
COL27A1-205ENST00000485397 RFPL2O75678 378 aa21.31■■□□□ 1
COL27A1-205ENST00000485397 FUT10Q6P4F1 479 aa21.31■■□□□ 1
COL27A1-205ENST00000485397 PALB2Q86YC2 1186 aa21.31■■□□□ 1
COL27A1-205ENST00000485397 C2orf16Q68DN1 1984 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 CACNA1HO95180 2353 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 GALR2O43603 387 aaPredicted RBP21.3■■□□□ 1
COL27A1-205ENST00000485397 N4BP1O75113 896 aaKnown RBP21.3■■□□□ 1
COL27A1-205ENST00000485397 GRIK3Q13003 919 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 SAFBQ15424 915 aaKnown RBP eCLIP21.3■■□□□ 1
COL27A1-205ENST00000485397 ZNF174Q15697 407 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 POTEGQ6S5H5 508 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 PPP4R3CPQ6ZMV5 832 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 MCPH1Q8NEM0 835 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 BSNDQ8WZ55 320 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 NACC1Q96RE7 527 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 POLR3CQ9BUI4 534 aaPredicted RBP21.3■■□□□ 1
COL27A1-205ENST00000485397 MFSD1Q9H3U5 465 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 FZD8Q9H461 694 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 KCNK12Q9HB15 430 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 PRMT7Q9NVM4 692 aaPredicted RBP21.3■■□□□ 1
COL27A1-205ENST00000485397 PLXNA3P51805 1871 aa21.3■■□□□ 1
COL27A1-205ENST00000485397 TDRD15B5MCY1 1934 aaKnown RBP21.29■■□□□ 1
COL27A1-205ENST00000485397 NUBP1P53384 320 aa21.29■■□□□ 1
COL27A1-205ENST00000485397 TDGQ13569 410 aa21.29■■□□□ 1
COL27A1-205ENST00000485397 USP41Q3LFD5 358 aa21.29■■□□□ 1
COL27A1-205ENST00000485397 CDCA2Q69YH5 1023 aaPredicted RBP21.29■■□□□ 1
COL27A1-205ENST00000485397 ASTLQ6HA08 431 aaPredicted RBP21.29■■□□□ 1
COL27A1-205ENST00000485397 GLYCTKQ8IVS8 523 aa21.29■■□□□ 1
COL27A1-205ENST00000485397 CCDC83Q8IWF9 413 aa21.29■■□□□ 1
COL27A1-205ENST00000485397 ZBTB8OSQ8IWT0 167 aa21.29■■□□□ 1
COL27A1-205ENST00000485397 RIN2Q8WYP3 895 aaPredicted RBP21.29■■□□□ 1
COL27A1-205ENST00000485397 PAAF1Q9BRP4 392 aa21.29■■□□□ 1
COL27A1-205ENST00000485397 IRF2BPLQ9H1B7 796 aa21.29■■□□□ 1
COL27A1-205ENST00000485397 WDR6Q9NNW5 1121 aaKnown RBP21.29■■□□□ 1
COL27A1-205ENST00000485397 ADAM28Q9UKQ2 775 aa21.29■■□□□ 1
COL27A1-205ENST00000485397 USP20Q9Y2K6 914 aa21.29■■□□□ 1
COL27A1-205ENST00000485397 TADA2AO75478 443 aa21.28■■□□□ 1
COL27A1-205ENST00000485397 RPL17P18621 184 aaKnown RBP21.28■■□□□ 1
COL27A1-205ENST00000485397 GBP2P32456 591 aaPredicted RBP21.28■■□□□ 1
COL27A1-205ENST00000485397 FAM187BQ17R55 369 aa21.28■■□□□ 1
COL27A1-205ENST00000485397 PADI6Q6TGC4 694 aa21.28■■□□□ 1
COL27A1-205ENST00000485397 SMG7Q92540 1137 aaKnown RBP21.28■■□□□ 1
COL27A1-205ENST00000485397 ZNF707Q96C28 371 aaPredicted RBP21.28■■□□□ 1
COL27A1-205ENST00000485397 C8orf76Q96K31 380 aa21.28■■□□□ 1
COL27A1-205ENST00000485397 PRIMPOLQ96LW4 560 aa21.28■■□□□ 1
COL27A1-205ENST00000485397 CXCL16Q9H2A7 254 aa21.28■■□□□ 1
COL27A1-205ENST00000485397 PDZD7Q9H5P4 517 aa21.28■■□□□ 1
COL27A1-205ENST00000485397 SNTG2Q9NY99 539 aa21.28■■□□□ 1
COL27A1-205ENST00000485397 DPP7Q9UHL4 492 aa21.28■■□□□ 1
COL27A1-205ENST00000485397 ZMYM2Q9UBW7 1377 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 TGM5O43548 720 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 OR52Z1P0C646 297 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 CYP11B2P19099 503 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 CWF19L1Q69YN2 538 aaKnown RBP21.27■■□□□ 1
COL27A1-205ENST00000485397 ELMSAN1Q6PJG2 1045 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 FLCNQ8NFG4 579 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 RSAD2Q8WXG1 361 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 MYADMQ96S97 322 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 RHOBTB2Q9BYZ6 727 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 POLD4Q9HCU8 107 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.27■■□□□ 1
COL27A1-205ENST00000485397 DUSP12Q9UNI6 340 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 LIMCH1Q9UPQ0 1083 aa21.27■■□□□ 1
COL27A1-205ENST00000485397 CLUHO75153 1309 aa21.27■□□□□ 0.99
COL27A1-205ENST00000485397 ARHGEF35A5YM69 484 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1427.3 ms