RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 FAPQ12884 760 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 PLEKHG4Q58EX7 1191 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 LDLRAD3Q86YD5 345 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 UBR7Q8N806 425 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 SUPT20HQ8NEM7 779 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 OR52N2Q8NGI0 321 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 MDM1Q8TC05 714 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 TFAP2CQ92754 450 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 PHACTR3Q96KR7 559 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 UHRF1Q96T88 793 aaPredicted RBP5.79□□□□□ -1.48
SMC4-215ENST00000484799 SLC46A2Q9BY10 475 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 ENKD1Q9H0I2 346 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 CAAP1Q9H8G2 361 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 EDARQ9UNE0 448 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 CDY2AQ9Y6F7 541 aa5.79□□□□□ -1.48
SMC4-215ENST00000484799 A0A087X0B3 334 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 TLDC2A0PJX2 215 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 TBKBP1A7MCY6 615 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 DIRC3C9JPN6 131 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 B3GALT2O43825 422 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 NDUFA10O95299 355 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 MTHFD2P13995 350 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 CANXP27824 592 aaKnown RBP5.78□□□□□ -1.48
SMC4-215ENST00000484799 ADSLP30566 484 aaPredicted RBP5.78□□□□□ -1.48
SMC4-215ENST00000484799 NHLH2Q02577 135 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 TRIM25Q14258 630 aaKnown RBP5.78□□□□□ -1.48
SMC4-215ENST00000484799 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMC4-215ENST00000484799 PITRM1Q5JRX3 1037 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 GJC2Q5T442 439 aaPredicted RBP5.78□□□□□ -1.48
SMC4-215ENST00000484799 C1QL3Q5VWW1 255 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 ABHD15Q6UXT9 468 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 GDF7Q7Z4P5 450 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 RPUSD2Q8IZ73 545 aaKnown RBP5.78□□□□□ -1.48
SMC4-215ENST00000484799 CHAC2Q8WUX2 184 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 REXO4Q9GZR2 422 aaKnown RBP5.78□□□□□ -1.48
SMC4-215ENST00000484799 GPRC5DQ9NZD1 345 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 DPP7Q9UHL4 492 aa5.78□□□□□ -1.48
SMC4-215ENST00000484799 APOBEC2Q9Y235 224 aaKnown RBP5.78□□□□□ -1.48
SMC4-215ENST00000484799 NEMP1O14524 444 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 BRINP1O60477 761 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 CFBP00751 764 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 BMP5P22003 454 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 CTSSP25774 331 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 CNGA1P29973 690 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 RNASE9P60153 205 aaKnown RBP5.77□□□□□ -1.49
SMC4-215ENST00000484799 TAP1Q03518 808 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 FSCN1Q16658 493 aaKnown RBP5.77□□□□□ -1.49
SMC4-215ENST00000484799 SPDYE7PQ495Y7 208 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 MBNL2Q5VZF2 373 aaKnown RBP5.77□□□□□ -1.49
SMC4-215ENST00000484799 LRRC55Q6ZSA7 311 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 PLXDC1Q8IUK5 500 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 VRK3Q8IV63 474 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 OR10H5Q8NGA6 315 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 ZNF480Q8WV37 535 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 FATE1Q969F0 183 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 LSM14BQ9BX40 385 aaKnown RBP5.77□□□□□ -1.49
SMC4-215ENST00000484799 AKIP1Q9NQ31 210 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 TOPORSQ9NS56 1045 aaPredicted RBP5.77□□□□□ -1.49
SMC4-215ENST00000484799 RNF181Q9P0P0 153 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 ZNHIT2Q9UHR6 403 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 PACSIN3Q9UKS6 424 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 TMPRSS11EQ9UL52 423 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 ZMYM3Q14202 1370 aa5.77□□□□□ -1.49
SMC4-215ENST00000484799 GAGE12BA1L429 117 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 GAGE12HA6NDE8 117 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 BPIP17213 487 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 ENPP1P22413 925 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 CRHR1P34998 444 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 AVPR1BP47901 424 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 SCAND1P57086 179 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 CCT2P78371 535 aaKnown RBP5.76□□□□□ -1.49
SMC4-215ENST00000484799 AUTS2Q8WXX7 1259 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 CAVIN3Q969G5 261 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 MYEOVQ96EZ4 313 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 CPEB1Q9BZB8 566 aaKnown RBP5.76□□□□□ -1.49
SMC4-215ENST00000484799 RIOX1Q9H6W3 641 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 ATP11BQ9Y2G3 1177 aa5.76□□□□□ -1.49
SMC4-215ENST00000484799 NUDT3O95989 172 aa5.75□□□□□ -1.49
SMC4-215ENST00000484799 HSD3B2P26439 372 aa5.75□□□□□ -1.49
SMC4-215ENST00000484799 ID4P47928 161 aa5.75□□□□□ -1.49
SMC4-215ENST00000484799 NANOS3P60323 173 aaKnown RBP5.75□□□□□ -1.49
SMC4-215ENST00000484799 PDCD1Q15116 288 aa5.75□□□□□ -1.49
SMC4-215ENST00000484799 ERCC6LQ2NKX8 1250 aa5.75□□□□□ -1.49
SMC4-215ENST00000484799 DRICH1Q6PGQ1 229 aaPredicted RBP5.75□□□□□ -1.49
SMC4-215ENST00000484799 BTNL9Q6UXG8 535 aa5.75□□□□□ -1.49
SMC4-215ENST00000484799 GPR156Q8NFN8 814 aa5.75□□□□□ -1.49
SMC4-215ENST00000484799 RIN2Q8WYP3 895 aaPredicted RBP5.75□□□□□ -1.49
SMC4-215ENST00000484799 ADI1Q9BV57 179 aa5.75□□□□□ -1.49
SMC4-215ENST00000484799 MLST8Q9BVC4 326 aa5.75□□□□□ -1.49
SMC4-215ENST00000484799 ZNF768Q9H5H4 540 aaKnown RBP5.75□□□□□ -1.49
SMC4-215ENST00000484799 ANKFY1Q9P2R3 1169 aa5.75□□□□□ -1.49
SMC4-215ENST00000484799 GRXCR1A8MXD5 290 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 AHRRA9YTQ3 701 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 NCR1O76036 304 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 ECHS1P30084 290 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 CLRN1P58418 232 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 MRPS9P82933 396 aaKnown RBP5.74□□□□□ -1.49
SMC4-215ENST00000484799 GUCY1B3Q02153 619 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 BMT2Q1RMZ1 405 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 MUM1L1Q5H9M0 696 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms