RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ELMSAN1Q6PJG2 1045 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 TAS1R1Q7RTX1 841 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 GSTCDQ8NEC7 633 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 ERMNQ8TAM6 284 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 TRIM6Q9C030 488 aaPredicted RBP12.7□□□□□ -0.38
SCFD1-206ENST00000484733 C2orf40Q9H1Z8 148 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 CHST7Q9NS84 486 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 HES2Q9Y543 173 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 ADH1AP07327 375 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 WEE2P0C1S8 567 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 FOSBP53539 338 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 GRIK3Q13003 919 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 TMC5Q6UXY8 1006 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 ACSF2Q96CM8 615 aaPredicted RBP12.7□□□□□ -0.38
SCFD1-206ENST00000484733 C8orf76Q96K31 380 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 IRF2BPLQ9H1B7 796 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 NXF3Q9H4D5 531 aaKnown RBP12.7□□□□□ -0.38
SCFD1-206ENST00000484733 FNIP2Q9P278 1114 aa12.7□□□□□ -0.38
SCFD1-206ENST00000484733 PRG3Q9Y2Y8 225 aaPredicted RBP12.7□□□□□ -0.38
SCFD1-206ENST00000484733 C5orf42Q9H799 3197 aa12.69□□□□□ -0.38
SCFD1-206ENST00000484733 B4GALT5O43286 388 aa12.69□□□□□ -0.38
SCFD1-206ENST00000484733 NPTXRO95502 500 aa12.69□□□□□ -0.38
SCFD1-206ENST00000484733 SSBP05455 408 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCFD1-206ENST00000484733 OR52Z1P0C646 297 aa12.69□□□□□ -0.38
SCFD1-206ENST00000484733 CYP11B2P19099 503 aa12.69□□□□□ -0.38
SCFD1-206ENST00000484733 SP100P23497 879 aaPredicted RBP12.69□□□□□ -0.38
SCFD1-206ENST00000484733 TRAPPC10P48553 1259 aa12.69□□□□□ -0.38
SCFD1-206ENST00000484733 HMGN5P82970 282 aaKnown RBP12.69□□□□□ -0.38
SCFD1-206ENST00000484733 OTOP3Q7RTS5 596 aa12.69□□□□□ -0.38
SCFD1-206ENST00000484733 ZBTB8OSQ8IWT0 167 aa12.69□□□□□ -0.38
SCFD1-206ENST00000484733 ZFP42Q96MM3 310 aa12.69□□□□□ -0.38
SCFD1-206ENST00000484733 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCFD1-206ENST00000484733 PLXNA3P51805 1871 aa12.69□□□□□ -0.38
SCFD1-206ENST00000484733 A0A087WWV3 80 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 N4BP3O15049 544 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 TEX28O15482 410 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 BRD1O95696 1058 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 TCF15Q12870 199 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 CCDC83Q8IWF9 413 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 FBXO18Q8NFZ0 1043 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 GPRC5CQ9NQ84 441 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 SH2B1Q9NRF2 756 aaPredicted RBP12.68□□□□□ -0.38
SCFD1-206ENST00000484733 LIMD1Q9UGP4 676 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 STK24Q9Y6E0 443 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 MUC6Q6W4X9 2439 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 LRRIQ4A6NIV6 560 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 RBM25P49756 843 aaKnown RBP12.68□□□□□ -0.38
SCFD1-206ENST00000484733 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.38
SCFD1-206ENST00000484733 VCPP55072 806 aaKnown RBP12.68□□□□□ -0.38
SCFD1-206ENST00000484733 GUCY1B3Q02153 619 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 CREMQ03060 361 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 ZNF174Q15697 407 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 CCDC149Q6ZUS6 474 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 C4orf32Q8N8J7 132 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 APOL6Q9BWW8 343 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 CCDC113Q9H0I3 377 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 MAN1C1Q9NR34 630 aa12.68□□□□□ -0.38
SCFD1-206ENST00000484733 C2orf16Q68DN1 1984 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 GLUD1P00367 558 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 AKAP5P24588 427 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 NAMPTP43490 491 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 PPP2R5AQ15172 486 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 USP41Q3LFD5 358 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 TTC38Q5R3I4 469 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 FUT10Q6P4F1 479 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 PADI6Q6TGC4 694 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 PLEKHA4Q9H4M7 779 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 ADAM28Q9UKQ2 775 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 MTCL1Q9Y4B5 1905 aaKnown RBP12.67□□□□□ -0.38
SCFD1-206ENST00000484733 ARHGEF35A5YM69 484 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 SPDYE4A6NLX3 237 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 ACKR2O00590 384 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 TUSC3Q13454 348 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 PDIA5Q14554 519 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 HAUS3Q68CZ6 603 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 LILRA6Q6PI73 481 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 MAEAQ7L5Y9 396 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 NOSTRINQ8IVI9 506 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 GPR62Q9BZJ7 368 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 PDZD7Q9H5P4 517 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 WDR6Q9NNW5 1121 aaKnown RBP12.67□□□□□ -0.38
SCFD1-206ENST00000484733 NOL7Q9UMY1 257 aaKnown RBP12.67□□□□□ -0.38
SCFD1-206ENST00000484733 MYO10Q9HD67 2058 aa12.67□□□□□ -0.38
SCFD1-206ENST00000484733 C2CD2LO14523 706 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 MAPK6Q16659 721 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 POTEGQ6S5H5 508 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 CDR2LQ86X02 465 aaPredicted RBP12.66□□□□□ -0.38
SCFD1-206ENST00000484733 FEZF2Q8TBJ5 459 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 BSNDQ8WZ55 320 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 IGSF9Q9P2J2 1179 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 CCDC195A0A1B0GUA6 201 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 F8W810 466 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 PRKCBP05771 671 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 ASGR2P07307 311 aa12.66□□□□□ -0.38
SCFD1-206ENST00000484733 U2AF2P26368 475 aaKnown RBP eCLIP12.66□□□□□ -0.382e-8■■■■□ 20.1
SCFD1-206ENST00000484733 PRPF4BQ13523 1007 aaKnown RBP12.66□□□□□ -0.38
SCFD1-206ENST00000484733 HSP90AA2PQ14568 343 aaPredicted RBP12.66□□□□□ -0.38
SCFD1-206ENST00000484733 ZDHHC7Q9NXF8 308 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms