RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 ANGPT1Q15389 498 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 XKR9Q5GH70 373 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 CATSPER3Q86XQ3 398 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 URGCPQ8TCY9 931 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 PGBD4Q96DM1 585 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 CCDC43Q96MW1 224 aaKnown RBP11.08□□□□□ -0.64
CPSF4-213ENST00000484112 VN1R3Q9BXE9 311 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 WRAP73Q9P2S5 460 aaPredicted RBP11.08□□□□□ -0.64
CPSF4-213ENST00000484112 MTMR6Q9Y217 621 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 FAN1Q9Y2M0 1017 aa11.08□□□□□ -0.64
CPSF4-213ENST00000484112 CARNS1A5YM72 827 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 NARSO43776 548 aaKnown RBP11.07□□□□□ -0.64
CPSF4-213ENST00000484112 B4GALT3O60512 393 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 DDHD2O94830 711 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 POMCP01189 267 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 ALDH2P05091 517 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 CFHP08603 1231 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 CNPP09543 421 aaKnown RBP11.07□□□□□ -0.64
CPSF4-213ENST00000484112 GBP2P32456 591 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-213ENST00000484112 LONP1P36776 959 aaKnown RBP11.07□□□□□ -0.64
CPSF4-213ENST00000484112 RARRES1P49788 294 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 RAB27AP51159 221 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 CLCN4P51793 760 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 POU5F1BQ06416 359 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 RESTQ13127 1097 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 NBR1Q14596 966 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 ATL3Q6DD88 541 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 CCDC105Q8IYK2 499 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 DTWD2Q8NBA8 298 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 MCPH1Q8NEM0 835 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 PSPC1Q8WXF1 523 aaKnown RBP11.07□□□□□ -0.64
CPSF4-213ENST00000484112 RSAD2Q8WXG1 361 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 MTRQ99707 1265 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 RTP3Q9BQQ7 232 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 TRAIPQ9BWF2 469 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 NT5C3AQ9H0P0 336 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 MRPL17Q9NRX2 175 aaKnown RBP11.07□□□□□ -0.64
CPSF4-213ENST00000484112 DUSP12Q9UNI6 340 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 PCDHB2Q9Y5E7 798 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 TRIOO75962 3097 aa11.07□□□□□ -0.64
CPSF4-213ENST00000484112 ZFHX2Q9C0A1 2572 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-213ENST00000484112 PTPRZ1P23471 2315 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-213ENST00000484112 CCDC195A0A1B0GUA6 201 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 NRP1O14786 923 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 ZNF623O75123 536 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 MED24O75448 989 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 CCT6AP40227 531 aaKnown RBP11.06□□□□□ -0.64
CPSF4-213ENST00000484112 AFF1P51825 1210 aaKnown RBP11.06□□□□□ -0.64
CPSF4-213ENST00000484112 NPEPPSP55786 919 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 TFDP1Q14186 410 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 EMC2Q15006 297 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 SF3A1Q15459 793 aaKnown RBP11.06□□□□□ -0.64
CPSF4-213ENST00000484112 HYIQ5T013 277 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 PLA2G4FQ68DD2 849 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 AGMOQ6ZNB7 445 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 ERMP1Q7Z2K6 904 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 FERMT3Q86UX7 667 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 SNX29Q8TEQ0 813 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 RSPH1Q8WYR4 309 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 NFKBIZQ9BYH8 718 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 RSAD1Q9HA92 442 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 MAN1C1Q9NR34 630 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 KCND2Q9NZV8 630 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 IGSF9Q9P2J2 1179 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 CA14Q9ULX7 337 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 CACNA1HO95180 2353 aa11.06□□□□□ -0.64
CPSF4-213ENST00000484112 URODP06132 367 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 SPATA31D3P0C874 917 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 SRGAP2CP0DJJ0 459 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 OR1G1P47890 313 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 SPECC1Q5M775 1068 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 C15orf39Q6ZRI6 1047 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 SPATA31D4Q6ZUB0 917 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 USP34Q70CQ2 3546 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 TAS1R1Q7RTX1 841 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 SRGAP1Q7Z6B7 1085 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 IFNLR1Q8IU57 520 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-213ENST00000484112 RIN2Q8WYP3 895 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-213ENST00000484112 ZNF396Q96N95 335 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-213ENST00000484112 TMEM175Q9BSA9 504 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 TIPINQ9BVW5 301 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 BMP2KQ9NSY1 1161 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-213ENST00000484112 KANSL3Q9P2N6 904 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 KCNG1Q9UIX4 513 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 DNM3Q9UQ16 869 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 PRG3Q9Y2Y8 225 aaPredicted RBP11.05□□□□□ -0.64
CPSF4-213ENST00000484112 COL4A3BPQ9Y5P4 624 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 ARID2Q68CP9 1835 aa11.05□□□□□ -0.64
CPSF4-213ENST00000484112 ARHGEF35A5YM69 484 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 VWA3AA6NCI4 1184 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 INPPL1O15357 1258 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 LILRB3O75022 631 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 N4BP1O75113 896 aaKnown RBP11.04□□□□□ -0.64
CPSF4-213ENST00000484112 SOD2P04179 222 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 ZSCAN22P10073 491 aaPredicted RBP11.04□□□□□ -0.64
CPSF4-213ENST00000484112 CYP11B2P19099 503 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 ARL2P36404 184 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 UBA7P41226 1012 aa11.04□□□□□ -0.64
CPSF4-213ENST00000484112 NASPP49321 788 aaPredicted RBP11.04□□□□□ -0.64
CPSF4-213ENST00000484112 PTPAQ15257 358 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms