RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 FAM13BQ9NYF5 915 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 CEP131Q9UPN4 1083 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 LCTP09848 1927 aa9.99□□□□□ -0.81
COL8A1-207ENST00000483969 KIAA0100Q14667 2235 aaKnown RBP9.98□□□□□ -0.81
COL8A1-207ENST00000483969 RSPH10B2B2RC85 870 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 F8W735 103 aaPredicted RBP9.98□□□□□ -0.81
COL8A1-207ENST00000483969 MAGEB2O15479 319 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 FGBP02675 491 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 PFKMP08237 780 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 RSPH10BP0C881 870 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 CKBP12277 381 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 CSF2RAP15509 400 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 THPOP40225 353 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 QARSP47897 775 aaKnown RBP9.98□□□□□ -0.81
COL8A1-207ENST00000483969 PSMC5P62195 406 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 RBL2Q08999 1139 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 ELOAQ14241 798 aaKnown RBP9.98□□□□□ -0.81
COL8A1-207ENST00000483969 XKR3Q5GH77 459 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 NCAPH2Q6IBW4 605 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 BRAPQ7Z569 592 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 RPAINQ86UA6 219 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 ETFBKMTQ8IXQ9 262 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 TDHQ8IZJ6 230 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 NME8Q8N427 588 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 LMBR1Q8WVP7 490 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 MTIF3Q9H2K0 278 aaKnown RBP9.98□□□□□ -0.81
COL8A1-207ENST00000483969 PRO3102Q9H379 93 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 TUBE1Q9UJT0 475 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 VAV3Q9UKW4 847 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 PCDHA2Q9Y5H9 948 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 COL1A2P08123 1366 aa9.98□□□□□ -0.81
COL8A1-207ENST00000483969 CENPFP49454 3210 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 SMIM35A0A1B0GVV1 85 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 MBLAC1A4D2B0 266 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-207ENST00000483969 VPS37CA5D8V6 355 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-207ENST00000483969 LAD1O00515 517 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 OR52Z1P0C646 297 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 ACTN1P12814 892 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 SYT1P21579 422 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 KLRC1P26715 233 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 TOB1P50616 345 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-207ENST00000483969 TRIP4Q15650 581 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-207ENST00000483969 OCLNQ16625 522 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 TMEM266Q2M3C6 531 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 TRIM71Q2Q1W2 868 aaKnown RBP9.97□□□□□ -0.81
COL8A1-207ENST00000483969 HABP4Q5JVS0 413 aaKnown RBP9.97□□□□□ -0.81
COL8A1-207ENST00000483969 MARCH8Q5T0T0 291 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 PSRC1Q6PGN9 363 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-207ENST00000483969 MTHFD1LQ6UB35 978 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 Q6ZS46 218 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 LRRC8DQ7L1W4 858 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 OTUD6AQ7L8S5 288 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 TRMT1LQ7Z2T5 733 aaKnown RBP9.97□□□□□ -0.81
COL8A1-207ENST00000483969 EXOC8Q8IYI6 725 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 NEK9Q8TD19 979 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 DHX38Q92620 1227 aaKnown RBP9.97□□□□□ -0.81
COL8A1-207ENST00000483969 SCLYQ96I15 445 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 PRIMPOLQ96LW4 560 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 CTAGE1Q96RT6 745 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 RAB34Q9BZG1 259 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 FTOQ9C0B1 505 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL8A1-207ENST00000483969 WNT8AQ9H1J5 351 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 TMEM60Q9H2L4 133 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 ZSWIM4Q9H7M6 989 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 UMODL1Q5DID0 1318 aa9.97□□□□□ -0.81
COL8A1-207ENST00000483969 M0QZ92 97 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 ZNF862O60290 1169 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 PRMT3O60678 531 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 ACRP10323 421 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 TMOD1P28289 359 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 TECP42680 631 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 BECN1Q14457 450 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 PDIA5Q14554 519 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 SHHQ15465 462 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 TMEM240Q5SV17 173 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 ZNF618Q5T7W0 954 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 DTHD1Q6ZMT9 781 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 ZNF365Q70YC5 407 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 DEFB128Q7Z7B8 93 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 C4orf19Q8IY42 314 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 C4orf32Q8N8J7 132 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 ERMNQ8TAM6 284 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 DNAJB3Q8WWF6 145 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 DYDC2Q96IM9 177 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 EIF2AK1Q9BQI3 630 aaKnown RBP9.96□□□□□ -0.82
COL8A1-207ENST00000483969 JPH2Q9BR39 696 aaPredicted RBP9.96□□□□□ -0.82
COL8A1-207ENST00000483969 ZSCAN16Q9H4T2 348 aaPredicted RBP9.96□□□□□ -0.82
COL8A1-207ENST00000483969 PPME1Q9Y570 386 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 PCDHB6Q9Y5E3 794 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 IGSF9BQ9UPX0 1349 aa9.96□□□□□ -0.82
COL8A1-207ENST00000483969 KRTAP9-6A0A140TA67 174 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 STX6O43752 255 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 SLITRK3O94933 977 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 BMP15O95972 392 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 XRCC6P12956 609 aaKnown RBP eCLIP9.95□□□□□ -0.82
COL8A1-207ENST00000483969 FSTP19883 344 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 PRPHP41219 470 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 DNM2P50570 870 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 EPHB4P54760 987 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 CDC42EP1Q00587 391 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms