RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CBLCQ9ULV8 474 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 TMEM98Q9Y2Y6 226 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 RWDD3Q9Y3V2 267 aa5.25□□□□□ -1.57
PTCD3-214ENST00000483925 CSTBP04080 98 aaKnown RBP5.24□□□□□ -1.57
PTCD3-214ENST00000483925 ITGB3P05106 788 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 PYGLP06737 847 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 LCP1P13796 627 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 CASP5P51878 434 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 KIF11P52732 1056 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 SRSF2Q01130 221 aaKnown RBP5.24□□□□□ -1.57
PTCD3-214ENST00000483925 CACNB2Q08289 660 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-214ENST00000483925 TAF12Q16514 161 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 TOR2AQ5JU69 321 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 WDR45BQ5MNZ6 344 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 FKBP15Q5T1M5 1219 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 VPS53Q5VIR6 699 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 TSHZ3Q63HK5 1081 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 EP400NLQ6ZTU2 488 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 SYTL1Q8IYJ3 562 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 ZNF527Q8NB42 609 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 RCBTB1Q8NDN9 531 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 TRAPPC12Q8WVT3 735 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 RPGRQ92834 1020 aaKnown RBP5.24□□□□□ -1.57
PTCD3-214ENST00000483925 KIAA1191Q96A73 305 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 FERMT2Q96AC1 680 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 COA7Q96BR5 231 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 ZBTB8AQ96BR9 441 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 TMEM41AQ96HV5 264 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 ZSCAN31Q96LW9 406 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-214ENST00000483925 NOX5Q96PH1 765 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 MMP19Q99542 508 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 MCMBPQ9BTE3 642 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 SLC26A6Q9BXS9 759 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 LRRC27Q9C0I9 530 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 OSBPL5Q9H0X9 879 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-214ENST00000483925 SMC4Q9NTJ3 1288 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 TBC1D22BQ9NU19 505 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 SPATA6Q9NWH7 488 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-214ENST00000483925 MAGED2Q9UNF1 606 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-214ENST00000483925 PCDHA2Q9Y5H9 948 aa5.24□□□□□ -1.57
PTCD3-214ENST00000483925 A0A1W2PRQ8 180 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 RRN3P2A6NIE6 340 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 ZNF561-AS1K7EIQ3 104 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 ARNTLO00327 626 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 BAIAP3O94812 1187 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 IFIT1P09914 478 aaKnown RBP5.23□□□□□ -1.57
PTCD3-214ENST00000483925 DHRS4L1P0CG22 281 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 OSMP13725 252 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 PDE6AP16499 860 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 PAMP19021 973 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 CAPN3P20807 821 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 MAPK10P53779 464 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 TERF1P54274 439 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 ARL4CP56559 192 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 MRPS9P82933 396 aaKnown RBP5.23□□□□□ -1.57
PTCD3-214ENST00000483925 MPP1Q00013 466 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 LSAMPQ13449 338 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 STARD3Q14849 445 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 GPR19Q15760 415 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 UGT8Q16880 541 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 ALDH1L2Q3SY69 923 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 FAM180BQ6P0A1 224 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 FAM43BQ6ZT52 329 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-214ENST00000483925 RFX8Q6ZV50 586 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 BRINP3Q76B58 766 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 MAEAQ7L5Y9 396 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 ZNF761Q86XN6 746 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-214ENST00000483925 CCDC103Q8IW40 242 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 OR8H2Q8N162 312 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 SDR16C5Q8N3Y7 309 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 BRI3BPQ8WY22 251 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 ZBTB10Q96DT7 871 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 APIPQ96GX9 242 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 RAX2Q96IS3 184 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 ZMAT4Q9H898 229 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 KMT5AQ9NQR1 393 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 SMPD4Q9NXE4 827 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 CLEC1BQ9P126 229 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 FBLN5Q9UBX5 448 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 CRYL1Q9Y2S2 319 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 SNX13Q9Y5W8 968 aa5.23□□□□□ -1.57
PTCD3-214ENST00000483925 A6NCN8 305 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 KPNA5O15131 536 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 PPP1R11O60927 126 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-214ENST00000483925 SKAP2O75563 359 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-214ENST00000483925 THP07101 528 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 MYF5P13349 255 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 KRT15P19012 456 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 ELF1P32519 619 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 STT3AP46977 705 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 ADAM17P78536 824 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 C16orf54Q6UWD8 224 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 OSTM1Q86WC4 334 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 NME9Q86XW9 330 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 CPNE8Q86YQ8 564 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 MSL3Q8N5Y2 521 aaKnown RBP5.22□□□□□ -1.57
PTCD3-214ENST00000483925 NUP133Q8WUM0 1156 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 CHAMP1Q96JM3 812 aa5.22□□□□□ -1.57
PTCD3-214ENST00000483925 RBM15Q96T37 977 aaKnown RBP eCLIP5.22□□□□□ -1.57
PTCD3-214ENST00000483925 CGRRF1Q99675 332 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms