RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 PRKD2Q9BZL6 878 aa14.4□□□□□ -0.1
UBR4-213ENST00000483922 CXCL16Q9H2A7 254 aa14.4□□□□□ -0.1
UBR4-213ENST00000483922 ARHGEF3Q9NR81 526 aa14.4□□□□□ -0.1
UBR4-213ENST00000483922 FANCMQ8IYD8 2048 aa14.4□□□□□ -0.1
UBR4-213ENST00000483922 P4HBP07237 508 aaKnown RBP14.39□□□□□ -0.11
UBR4-213ENST00000483922 AKAP5P24588 427 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 PTENP60484 403 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 TOB2Q14106 344 aaPredicted RBP14.39□□□□□ -0.11
UBR4-213ENST00000483922 RTP2Q5QGT7 225 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 BLOC1S2Q6QNY1 142 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 MOXD1Q6UVY6 613 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 PRSS55Q6UWB4 352 aaPredicted RBP14.39□□□□□ -0.11
UBR4-213ENST00000483922 GET4Q7L5D6 327 aaPredicted RBP14.39□□□□□ -0.11
UBR4-213ENST00000483922 DAGLBQ8NCG7 672 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 PJA1Q8NG27 643 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 PSPC1Q8WXF1 523 aaKnown RBP14.39□□□□□ -0.11
UBR4-213ENST00000483922 STAMQ92783 540 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 JPH2Q9BR39 696 aaPredicted RBP14.39□□□□□ -0.11
UBR4-213ENST00000483922 NXF3Q9H4D5 531 aaKnown RBP14.39□□□□□ -0.11
UBR4-213ENST00000483922 PLEKHA4Q9H4M7 779 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 ZDHHC7Q9NXF8 308 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.39□□□□□ -0.11
UBR4-213ENST00000483922 FNIP2Q9P278 1114 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 DDX25Q9UHL0 483 aaKnown RBP14.39□□□□□ -0.11
UBR4-213ENST00000483922 KCNJ14Q9UNX9 436 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 SSX2IPQ9Y2D8 614 aa14.39□□□□□ -0.11
UBR4-213ENST00000483922 MTCL1Q9Y4B5 1905 aaKnown RBP14.39□□□□□ -0.11
UBR4-213ENST00000483922 EPG5Q9HCE0 2579 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 SHISA7A6NL88 538 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 ADAM12O43184 909 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 B4GALT5O43286 388 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 SLITRK3O94933 977 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 C1RP00736 705 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 SPIRE1Q08AE8 756 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 SNW1Q13573 536 aaKnown RBP14.38□□□□□ -0.11
UBR4-213ENST00000483922 PUM1Q14671 1186 aaKnown RBP eCLIP14.38□□□□□ -0.118e-7■■■■□ 23.5
UBR4-213ENST00000483922 EARS2Q5JPH6 523 aaKnown RBP14.38□□□□□ -0.11
UBR4-213ENST00000483922 FUT10Q6P4F1 479 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 GRASPQ7Z6J2 395 aaPredicted RBP14.38□□□□□ -0.11
UBR4-213ENST00000483922 C4orf19Q8IY42 314 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 CNNM3Q8NE01 707 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 ASAP3Q8TDY4 903 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 SLC7A3Q8WY07 619 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 RUBCNQ92622 972 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 DYDC2Q96IM9 177 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 DDX23Q9BUQ8 820 aaKnown RBP14.38□□□□□ -0.11
UBR4-213ENST00000483922 APOL6Q9BWW8 343 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 CSRNP2Q9H175 543 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 PIDD1Q9HB75 910 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 UBN1Q9NPG3 1134 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 GJB4Q9NTQ9 266 aa14.38□□□□□ -0.11
UBR4-213ENST00000483922 A0A087WWV3 80 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 ZMYND10O75800 440 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 KRT37O76014 449 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 ARF4P18085 180 aaPredicted RBP14.37□□□□□ -0.11
UBR4-213ENST00000483922 YWHABP31946 246 aaKnown RBP14.37□□□□□ -0.11
UBR4-213ENST00000483922 RFC5P40937 340 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 MBTD1Q05BQ5 628 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 CTTNQ14247 550 aaKnown RBP14.37□□□□□ -0.11
UBR4-213ENST00000483922 EMC2Q15006 297 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 NONOQ15233 471 aaKnown RBP eCLIP14.37□□□□□ -0.11
UBR4-213ENST00000483922 EPHA7Q15375 998 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 IFNLR1Q8IU57 520 aaPredicted RBP14.37□□□□□ -0.11
UBR4-213ENST00000483922 ITFG1Q8TB96 612 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 CLSTN3Q9BQT9 956 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 COLEC11Q9BWP8 271 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 KLK14Q9P0G3 267 aa14.37□□□□□ -0.11
UBR4-213ENST00000483922 TTLL13PA6NNM8 815 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 ASAP2O43150 1006 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 CD72P21854 359 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 TGM1P22735 817 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 FSHRP23945 695 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 FZD5Q13467 585 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 CAPSQ13938 189 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 NAB2Q15742 525 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 RSPO4Q2I0M5 234 aaPredicted RBP14.36□□□□□ -0.11
UBR4-213ENST00000483922 USP41Q3LFD5 358 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 XKR9Q5GH70 373 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 GPR65Q8IYL9 337 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 LNX1Q8TBB1 728 aaPredicted RBP14.36□□□□□ -0.11
UBR4-213ENST00000483922 OXER1Q8TDS5 423 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 FAM20AQ96MK3 541 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 LXNQ9BS40 222 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 C22orf23Q9BZE7 217 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 DPP7Q9UHL4 492 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 ADAM28Q9UKQ2 775 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 GIT1Q9Y2X7 761 aa14.36□□□□□ -0.11
UBR4-213ENST00000483922 KANSL1LA0AUZ9 987 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 FAM205CA6NFA0 338 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 CDC45O75419 566 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 DEXIO95424 95 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 GLRA2P23416 452 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 AXLP30530 894 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 ARL2P36404 184 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 SSRP1Q08945 709 aaKnown RBP14.35□□□□□ -0.11
UBR4-213ENST00000483922 SLC44A4Q53GD3 710 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 PPP4R3AQ6IN85 833 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 TCP11Q8WWU5 503 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 FGF13Q92913 245 aa14.35□□□□□ -0.11
UBR4-213ENST00000483922 CNTNAP3BQ96NU0 1288 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms