RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 FRMD4BQ9Y2L6 1034 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 PPP2R2CQ9Y2T4 447 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 ADGRG1Q9Y653 693 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 SLC4A7Q9Y6M7 1214 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 RIF1Q5UIP0 2472 aaKnown RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 ASTN1O14525 1302 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 IGSF9BQ9UPX0 1349 aa5.92□□□□□ -1.46
COL17A1-206ENST00000483876 COL11A1P12107 1806 aaPredicted RBP5.92□□□□□ -1.46
COL17A1-206ENST00000483876 MAP1BP46821 2468 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 FAM186AA6NE01 2351 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 GSTTP1A0A1W2PQM5 241 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 SSU72P8A0A1W2PR75 194 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 EIF3CLB5ME19 914 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 H3BQ06 376 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 BACH1O14867 736 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 KIAA0391O15091 583 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 P4HA2O15460 535 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 GAS2O43903 313 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 LPXNO60711 386 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 LGR5O75473 907 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 AKAP3O75969 853 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 LCA5LO95447 670 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 AFPP02771 609 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 HOXC6P09630 235 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 UBA1P22314 1058 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 ANXA13P27216 316 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 MAPK4P31152 587 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 CYP2C19P33261 490 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 GTF2F1P35269 517 aaKnown RBP eCLIP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 RFC5P40937 340 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 STAT5BP51692 787 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 KRT83P78385 493 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 KCNMA1Q12791 1236 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 DMP1Q13316 513 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 TUBB2AQ13885 445 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 TTLL4Q14679 1199 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 TARBP2Q15633 366 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 UGCGQ16739 394 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 ZC2HC1CQ53FD0 456 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 CELF3Q5SZQ8 465 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 MORN1Q5T089 497 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 FAM160B1Q5W0V3 765 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 CCDC62Q6P9F0 684 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 TRIM65Q6PJ69 517 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 WDR59Q6PJI9 974 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 SEPT14Q6ZU15 432 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 INTS8Q75QN2 995 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 CYFIP1Q7L576 1253 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 ANKRD33Q7Z3H0 272 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 C17orf53Q8N3J3 647 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 TXLNBQ8N3L3 684 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 TMEM161BQ8NDZ6 487 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 TRPV1Q8NER1 839 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 NEK11Q8NG66 645 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 BBXQ8WY36 941 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 SLC35C1Q96A29 364 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 FAM167AQ96KS9 214 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 CEP170P1Q96L14 293 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 FGD4Q96M96 766 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 POP1Q99575 1024 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 EIF3CQ99613 913 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 JPH2Q9BR39 696 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 PAGR1Q9BTK6 254 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 TUBB2BQ9BVA1 445 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 DHX33Q9H6R0 707 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 ATP6V0A4Q9HBG4 840 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 IL23AQ9NPF7 189 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 AGPAT3Q9NRZ7 376 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 SLC5A4Q9NY91 659 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 AIPL1Q9NZN9 384 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 FLRT1Q9NZU1 646 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 LMCD1Q9NZU5 365 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 CEP72Q9P209 647 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 TBX21Q9UL17 535 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 PHF24Q9UPV7 400 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 USP20Q9Y2K6 914 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 BZW2Q9Y6E2 419 aaKnown RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 EPN1Q9Y6I3 576 aaPredicted RBP5.91□□□□□ -1.46
COL17A1-206ENST00000483876 GVINP1Q7Z2Y8 2422 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 MYO9BQ13459 2157 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 PHLPP2Q6ZVD8 1323 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 DOCK3Q8IZD9 2030 aa5.91□□□□□ -1.46
COL17A1-206ENST00000483876 PLXNB2O15031 1838 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 FRMPD3Q5JV73 1810 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 ASH1LQ9NR48 2969 aaKnown RBP5.9□□□□□ -1.46
COL17A1-206ENST00000483876 SLC15A5A6NIM6 579 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 USP27XA6NNY8 438 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 PES1O00541 588 aaKnown RBP5.9□□□□□ -1.46
COL17A1-206ENST00000483876 ASAP2O43150 1006 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 PPFIA4O75335 1185 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 MAFO75444 373 aaPredicted RBP5.9□□□□□ -1.46
COL17A1-206ENST00000483876 NOL4O94818 638 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 NDUFA10O95299 355 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 OATP04181 439 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 ATP2A2P16615 1042 aaKnown RBP5.9□□□□□ -1.46
COL17A1-206ENST00000483876 ATP4AP20648 1035 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 GARTP22102 1010 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 RFX1P22670 979 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 GTF2H1P32780 548 aa5.9□□□□□ -1.46
COL17A1-206ENST00000483876 CYLC1P35663 651 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms