RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 ZNF445P59923 1031 aa15.43■□□□□ 0.06
SRSF6-202ENST00000483871 PPIGQ13427 754 aaKnown RBP eCLIP15.43■□□□□ 0.063e-16■□□□□ 10.7
SRSF6-202ENST00000483871 NOLC1Q14978 699 aaKnown RBP eCLIP15.43■□□□□ 0.06
SRSF6-202ENST00000483871 SLFN12LQ6IEE8 588 aa15.43■□□□□ 0.06
SRSF6-202ENST00000483871 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.43■□□□□ 0.06
SRSF6-202ENST00000483871 ZNF365Q70YC5 407 aa15.43■□□□□ 0.06
SRSF6-202ENST00000483871 SMG8Q8ND04 991 aaKnown RBP15.43■□□□□ 0.06
SRSF6-202ENST00000483871 NOC3LQ8WTT2 800 aaKnown RBP15.43■□□□□ 0.06
SRSF6-202ENST00000483871 LBHD1Q9BQE6 289 aaPredicted RBP15.43■□□□□ 0.06
SRSF6-202ENST00000483871 ADPGKQ9BRR6 497 aa15.43■□□□□ 0.06
SRSF6-202ENST00000483871 MSTO1Q9BUK6 570 aa15.43■□□□□ 0.06
SRSF6-202ENST00000483871 FTHL17Q9BXU8 183 aa15.43■□□□□ 0.06
SRSF6-202ENST00000483871 TRIM6Q9C030 488 aaPredicted RBP15.43■□□□□ 0.06
SRSF6-202ENST00000483871 RGS18Q9NS28 235 aa15.43■□□□□ 0.06
SRSF6-202ENST00000483871 FAM105AQ9NUU6 356 aa15.43■□□□□ 0.06
SRSF6-202ENST00000483871 HSPBP1Q9NZL4 362 aa15.43■□□□□ 0.06
SRSF6-202ENST00000483871 AGO2Q9UKV8 859 aaKnown RBP15.43■□□□□ 0.06
SRSF6-202ENST00000483871 NR3C1P04150 777 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 GARTP22102 1010 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 NR2F2P24468 414 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 ERCC5P28715 1186 aaPredicted RBP15.42■□□□□ 0.06
SRSF6-202ENST00000483871 TNFSF9P41273 254 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 CASP4P49662 377 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 ACOT2P49753 483 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 ADAM9Q13443 819 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 IKBKEQ14164 716 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.42■□□□□ 0.066e-12■■□□□ 12
SRSF6-202ENST00000483871 TSPYL2Q9H2G4 693 aaPredicted RBP15.42■□□□□ 0.06
SRSF6-202ENST00000483871 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 NXF3Q9H4D5 531 aaKnown RBP15.42■□□□□ 0.06
SRSF6-202ENST00000483871 DMAC2Q9NW81 257 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 IPPQ9Y573 584 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 PCDHB2Q9Y5E7 798 aa15.42■□□□□ 0.06
SRSF6-202ENST00000483871 A0A0U1RQF3 1178 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 BICDL2A1A5D9 508 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 MEIS3P2A8K0S8 358 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 C9IYK1 514 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 FAM189A1O60320 539 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 FGBP02675 491 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 MCF2P10911 925 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 AKAP5P24588 427 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 MAGEA10P43363 369 aaPredicted RBP15.41■□□□□ 0.06
SRSF6-202ENST00000483871 ZNF165P49910 485 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 SNRPFP62306 86 aaKnown RBP15.41■□□□□ 0.06
SRSF6-202ENST00000483871 LRRC63Q05C16 580 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 TMEM240Q5SV17 173 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 CRELD2Q6UXH1 353 aaPredicted RBP15.41■□□□□ 0.06
SRSF6-202ENST00000483871 SLC24A5Q71RS6 500 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 GOLGA5Q8TBA6 731 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 LPPQ93052 612 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 TSG101Q99816 390 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 FAM213AQ9BRX8 229 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 APOL6Q9BWW8 343 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 SRRTQ9BXP5 876 aaKnown RBP15.41■□□□□ 0.06
SRSF6-202ENST00000483871 RNF19AQ9NV58 838 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 SNTG2Q9NY99 539 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 RANBP2P49792 3224 aaKnown RBP15.41■□□□□ 0.06
SRSF6-202ENST00000483871 OGTO15294 1046 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 PFKMP08237 780 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 STAG3L1P0CL83 205 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 ATF7P17544 494 aaPredicted RBP15.41■□□□□ 0.06
SRSF6-202ENST00000483871 FKBP3Q00688 224 aaKnown RBP15.41■□□□□ 0.06
SRSF6-202ENST00000483871 EDRF1Q3B7T1 1238 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 HSP90AA4PQ58FG1 418 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 CT47A1Q5JQC4 288 aaPredicted RBP15.41■□□□□ 0.06
SRSF6-202ENST00000483871 CEP135Q66GS9 1140 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 CBWD2Q8IUF1 395 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 C12orf56Q8IXR9 622 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 CSGALNACT2Q8N6G5 542 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 RNF169Q8NCN4 708 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 CCDC51Q96ER9 411 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 TRAIPQ9BWF2 469 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 CXCL16Q9H2A7 254 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 TSPY26PQ9H489 355 aa15.41■□□□□ 0.06
SRSF6-202ENST00000483871 CGNQ9P2M7 1197 aaKnown RBP15.41■□□□□ 0.06
SRSF6-202ENST00000483871 H0YGN5 161 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 TULP1O00294 542 aaPredicted RBP15.4■□□□□ 0.06
SRSF6-202ENST00000483871 EXOC3O60645 756 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 AKAP3O75969 853 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 FAM189BP81408 668 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 NFIL3Q16649 462 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 DCAF4L1Q3SXM0 396 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 LRRC55Q6ZSA7 311 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 MICAL3Q7RTP6 2002 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 TMCO2Q7Z6W1 182 aaPredicted RBP15.4■□□□□ 0.06
SRSF6-202ENST00000483871 ECHDC2Q86YB7 292 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 SLC9A9Q8IVB4 645 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 DHX40Q8IX18 779 aaKnown RBP15.4■□□□□ 0.06
SRSF6-202ENST00000483871 GPD1LQ8N335 351 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 AOPEPQ8N6M6 819 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 XXYLT1Q8NBI6 393 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 ENOX1Q8TC92 643 aaKnown RBP15.4■□□□□ 0.06
SRSF6-202ENST00000483871 CBX8Q9HC52 389 aa15.4■□□□□ 0.06
SRSF6-202ENST00000483871 SAMSN1Q9NSI8 373 aaKnown RBP15.4■□□□□ 0.06
SRSF6-202ENST00000483871 ABHD14A-ACY1A0A1B0GW23 586 aa15.39■□□□□ 0.05
SRSF6-202ENST00000483871 MEFVO15553 781 aaPredicted RBP15.39■□□□□ 0.05
SRSF6-202ENST00000483871 EXTL3O43909 919 aa15.39■□□□□ 0.05
SRSF6-202ENST00000483871 ZNF623O75123 536 aa15.39■□□□□ 0.05
SRSF6-202ENST00000483871 DEFB103AP81534 67 aa15.39■□□□□ 0.05
SRSF6-202ENST00000483871 NCAPHQ15003 741 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms