RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 GPR62Q9BZJ7 368 aa19.98■□□□□ 0.79
ATG4B-221ENST00000483778 KCNH6Q9H252 994 aa19.98■□□□□ 0.79
ATG4B-221ENST00000483778 TUFT1Q9NNX1 390 aa19.98■□□□□ 0.79
ATG4B-221ENST00000483778 MRPL17Q9NRX2 175 aaKnown RBP19.98■□□□□ 0.79
ATG4B-221ENST00000483778 DBR1Q9UK59 544 aaKnown RBP19.98■□□□□ 0.79
ATG4B-221ENST00000483778 CARNS1A5YM72 827 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 TEX28O15482 410 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 MRE11P49959 708 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 PCBP1Q15365 356 aaKnown RBP eCLIP19.97■□□□□ 0.79
ATG4B-221ENST00000483778 GPR149Q86SP6 731 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 ZBTB33Q86T24 672 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 FBXO18Q8NFZ0 1043 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 CCDC43Q96MW1 224 aaKnown RBP19.97■□□□□ 0.79
ATG4B-221ENST00000483778 RPS6KC1Q96S38 1066 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 PAAF1Q9BRP4 392 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 HERC2P3Q9BVR0 1158 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 EMILIN2Q9BXX0 1053 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 FZD8Q9H461 694 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 GIT1Q9Y2X7 761 aa19.97■□□□□ 0.79
ATG4B-221ENST00000483778 VWA8A3KMH1 1905 aa19.96■□□□□ 0.79
ATG4B-221ENST00000483778 AVPR2P30518 371 aa19.96■□□□□ 0.79
ATG4B-221ENST00000483778 NCBP1Q09161 790 aaKnown RBP19.96■□□□□ 0.79
ATG4B-221ENST00000483778 TCF15Q12870 199 aa19.96■□□□□ 0.79
ATG4B-221ENST00000483778 SAFBQ15424 915 aaKnown RBP eCLIP19.96■□□□□ 0.79
ATG4B-221ENST00000483778 SLC27A1Q6PCB7 646 aa19.96■□□□□ 0.79
ATG4B-221ENST00000483778 PPFIBP1Q86W92 1011 aa19.96■□□□□ 0.79
ATG4B-221ENST00000483778 NACC1Q96RE7 527 aa19.96■□□□□ 0.79
ATG4B-221ENST00000483778 PARP2Q9UGN5 583 aa19.96■□□□□ 0.79
ATG4B-221ENST00000483778 CACNA1HO95180 2353 aa19.96■□□□□ 0.79
ATG4B-221ENST00000483778 OR52Z1P0C646 297 aa19.95■□□□□ 0.78
ATG4B-221ENST00000483778 IGFBP6P24592 240 aaPredicted RBP19.95■□□□□ 0.78
ATG4B-221ENST00000483778 RPA1P27694 616 aa19.95■□□□□ 0.78
ATG4B-221ENST00000483778 TOB1P50616 345 aaPredicted RBP19.95■□□□□ 0.78
ATG4B-221ENST00000483778 TTC38Q5R3I4 469 aa19.95■□□□□ 0.78
ATG4B-221ENST00000483778 EEF1DP3Q658K8 133 aa19.95■□□□□ 0.78
ATG4B-221ENST00000483778 CDCA2Q69YH5 1023 aaPredicted RBP19.95■□□□□ 0.78
ATG4B-221ENST00000483778 PADI6Q6TGC4 694 aa19.95■□□□□ 0.78
ATG4B-221ENST00000483778 SUGP1Q8IWZ8 645 aaKnown RBP19.95■□□□□ 0.78
ATG4B-221ENST00000483778 ZDHHC14Q8IZN3 488 aa19.95■□□□□ 0.78
ATG4B-221ENST00000483778 LLPHQ9BRT6 129 aaKnown RBP19.95■□□□□ 0.78
ATG4B-221ENST00000483778 TRIM6Q9C030 488 aaPredicted RBP19.95■□□□□ 0.78
ATG4B-221ENST00000483778 FOXP1Q9H334 677 aaPredicted RBP19.95■□□□□ 0.78
ATG4B-221ENST00000483778 RXFP1Q9HBX9 757 aa19.95■□□□□ 0.78
ATG4B-221ENST00000483778 MAN1C1Q9NR34 630 aa19.95■□□□□ 0.78
ATG4B-221ENST00000483778 CHST7Q9NS84 486 aa19.95■□□□□ 0.78
ATG4B-221ENST00000483778 SORCS3Q9UPU3 1222 aa19.95■□□□□ 0.78
ATG4B-221ENST00000483778 N4BP1O75113 896 aaKnown RBP19.94■□□□□ 0.78
ATG4B-221ENST00000483778 RFPL2O75678 378 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 URODP06132 367 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 RPL17P18621 184 aaKnown RBP19.94■□□□□ 0.78
ATG4B-221ENST00000483778 CYP11B2P19099 503 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 GLUD2P49448 558 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 DSG1Q02413 1049 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 PPP4R3CPQ6ZMV5 832 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 PALB2Q86YC2 1186 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 GLYCTKQ8IVS8 523 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 TDRD5Q8NAT2 981 aaKnown RBP19.94■□□□□ 0.78
ATG4B-221ENST00000483778 KIFC3Q9BVG8 833 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 COLEC11Q9BWP8 271 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 CCDC113Q9H0I3 377 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 PDZD7Q9H5P4 517 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 SFXN1Q9H9B4 322 aa19.94■□□□□ 0.78
ATG4B-221ENST00000483778 CCDC195A0A1B0GUA6 201 aa19.93■□□□□ 0.78
ATG4B-221ENST00000483778 PTGESO14684 152 aa19.93■□□□□ 0.78
ATG4B-221ENST00000483778 LIG1P18858 919 aa19.93■□□□□ 0.78
ATG4B-221ENST00000483778 IL17AQ16552 155 aa19.93■□□□□ 0.78
ATG4B-221ENST00000483778 FAM187BQ17R55 369 aa19.93■□□□□ 0.78
ATG4B-221ENST00000483778 C8orf34Q49A92 452 aa19.93■□□□□ 0.78
ATG4B-221ENST00000483778 NOSTRINQ8IVI9 506 aa19.93■□□□□ 0.78
ATG4B-221ENST00000483778 MCPH1Q8NEM0 835 aa19.93■□□□□ 0.78
ATG4B-221ENST00000483778 SNTG2Q9NY99 539 aa19.93■□□□□ 0.78
ATG4B-221ENST00000483778 ARHGEF35A5YM69 484 aa19.92■□□□□ 0.78
ATG4B-221ENST00000483778 FUT10Q6P4F1 479 aa19.92■□□□□ 0.78
ATG4B-221ENST00000483778 HASPINQ8TF76 798 aa19.92■□□□□ 0.78
ATG4B-221ENST00000483778 PRMT7Q9NVM4 692 aaPredicted RBP19.92■□□□□ 0.78
ATG4B-221ENST00000483778 USTQ9Y2C2 406 aa19.92■□□□□ 0.78
ATG4B-221ENST00000483778 PCDHB6Q9Y5E3 794 aa19.92■□□□□ 0.78
ATG4B-221ENST00000483778 MYH11P35749 1972 aa19.92■□□□□ 0.78
ATG4B-221ENST00000483778 SPDYE4A6NLX3 237 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 PP2D1A8MPX8 630 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 CCT6AP40227 531 aaKnown RBP19.91■□□□□ 0.78
ATG4B-221ENST00000483778 RBM25P49756 843 aaKnown RBP19.91■□□□□ 0.78
ATG4B-221ENST00000483778 GRIK3Q13003 919 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 MTMR3Q13615 1198 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 NAB2Q15742 525 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 NT5DC1Q5TFE4 455 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 LILRA6Q6PI73 481 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 PRSS55Q6UWB4 352 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-221ENST00000483778 UBALD2Q8IYN6 164 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 RIN2Q8WYP3 895 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-221ENST00000483778 ZNF707Q96C28 371 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-221ENST00000483778 ZSCAN31Q96LW9 406 aaPredicted RBP19.91■□□□□ 0.78
ATG4B-221ENST00000483778 BHMT2Q9H2M3 363 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 FAM86C1Q9NVL1 165 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 STK39Q9UEW8 545 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 ADAM28Q9UKQ2 775 aa19.91■□□□□ 0.78
ATG4B-221ENST00000483778 NOTCH4Q99466 2003 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 CASTOR2A6NHX0 329 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 RECQL4O94761 1208 aa19.9■□□□□ 0.78
ATG4B-221ENST00000483778 PRKCBP05771 671 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms