RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ACBD3Q9H3P7 528 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 CCSER2Q9H7U1 834 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 AGO3Q9H9G7 860 aaKnown RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 SRA1Q9HD15 236 aaKnown RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 ALG13Q9NP73 1137 aaKnown RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 MUTYHQ9UIF7 546 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 PADI3Q9ULW8 664 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 PCDHA2Q9Y5H9 948 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 MRPL42Q9Y6G3 142 aaKnown RBP6.68□□□□□ -1.34
CSDE1-207ENST00000483407 IGSF9BQ9UPX0 1349 aa6.68□□□□□ -1.34
CSDE1-207ENST00000483407 SMIM35A0A1B0GVV1 85 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 EYA4O95677 639 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 FOSP01100 380 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-207ENST00000483407 ITGB1P05556 798 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 SNRPBP14678 240 aaKnown RBP6.67□□□□□ -1.34
CSDE1-207ENST00000483407 IBSPP21815 317 aaPredicted RBP6.67□□□□□ -1.34
CSDE1-207ENST00000483407 GTF2F1P35269 517 aaKnown RBP eCLIP6.67□□□□□ -1.34
CSDE1-207ENST00000483407 SARSP49591 514 aaKnown RBP6.67□□□□□ -1.34
CSDE1-207ENST00000483407 MRE11P49959 708 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 ACTR2P61160 394 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 KRT76Q01546 638 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 NHLH1Q02575 133 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 UBE3AQ05086 875 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 TMEM62Q0P6H9 643 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 HYAL2Q12891 473 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 ADAM15Q13444 863 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 PLCB4Q15147 1175 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 PKN1Q16512 942 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 ZNF394Q53GI3 561 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 FAM160B1Q5W0V3 765 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 HFE2Q6ZVN8 426 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 TMTC3Q6ZXV5 915 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 PLPPR4Q7Z2D5 763 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 ERMP1Q7Z2K6 904 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 MICU3Q86XE3 530 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 EFHBQ8N7U6 833 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 CEP120Q8N960 986 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 FANCBQ8NB91 859 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 KLHL23Q8NBE8 558 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 SPPL3Q8TCT6 385 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 MICAL1Q8TDZ2 1067 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 POF1BQ8WVV4 589 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 LINC01599Q8WXQ3 324 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 BHMTQ93088 406 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 GTPBP3Q969Y2 492 aaKnown RBP6.67□□□□□ -1.34
CSDE1-207ENST00000483407 MSLNLQ96KJ4 702 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 FBXL18Q96ME1 805 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 CNTNAP3BQ96NU0 1288 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 TCF12Q99081 682 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 PCYT2Q99447 389 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 CNTNAP3Q9BZ76 1288 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 GLT8D2Q9H1C3 349 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 ABCB6Q9NP58 842 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 KCNH7Q9NS40 1196 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 C1orf112Q9NSG2 853 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 RBM28Q9NW13 759 aaKnown RBP6.67□□□□□ -1.34
CSDE1-207ENST00000483407 GGT7Q9UJ14 662 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 GINS2Q9Y248 185 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 PCDHB7Q9Y5E2 793 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 PCDHB12Q9Y5F1 795 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 NFASCO94856 1347 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 KDM3AQ9Y4C1 1321 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 BRWD1Q9NSI6 2320 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 MICAL3Q7RTP6 2002 aa6.67□□□□□ -1.34
CSDE1-207ENST00000483407 hCG_1642624A0A1W2PR95 340 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 DENND3A2RUS2 1198 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 hCG_1984214I3L0E3 225 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 SLC27A2O14975 620 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 LINC01565O15544 149 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 HBP1O60381 514 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 PPFIA3O75145 1194 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 RPS6KA5O75582 802 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 SRGAP2BP0DMP2 458 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 FGFR3P22607 806 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 DNAJB1P25685 340 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 NRIP1P48552 1158 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 ADCY7P51828 1080 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 NRLP54845 237 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 NAPAP54920 295 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 COASYQ13057 564 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 AP3B2Q13367 1082 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 CAMK1Q14012 370 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 TMEM266Q2M3C6 531 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 CEP55Q53EZ4 464 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 MIS18BP1Q6P0N0 1132 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 MTHFD1LQ6UB35 978 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 BMP8AQ7Z5Y6 402 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 RAB44Q7Z6P3 723 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-207ENST00000483407 ADGRD2Q7Z7M1 963 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 RBM23Q86U06 439 aaKnown RBP6.66□□□□□ -1.34
CSDE1-207ENST00000483407 RTN4RL1Q86UN2 441 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-207ENST00000483407 SGMS1Q86VZ5 419 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 RAB11FIP4Q86YS3 637 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 CCNJLQ8IV13 435 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 SUGP1Q8IWZ8 645 aaKnown RBP6.66□□□□□ -1.34
CSDE1-207ENST00000483407 ZNF713Q8N859 430 aaPredicted RBP6.66□□□□□ -1.34
CSDE1-207ENST00000483407 SMRP1Q8NCR6 262 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 TRAPPC12Q8WVT3 735 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 EDAQ92838 391 aa6.66□□□□□ -1.34
CSDE1-207ENST00000483407 IRF7Q92985 503 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms