RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 TTLL13PA6NNM8 815 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 HIDE1A8MVS5 230 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 NRP1O14786 923 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 B4GALT3O60512 393 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 OR1G1P47890 313 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 SMTNP53814 917 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 SLC12A3P55017 1021 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 MAPK7Q13164 816 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 GIT2Q14161 759 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 ATF7IP2Q5U623 682 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 COLGALT2Q8IYK4 626 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 ZBP1Q9H171 429 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 TMEM134Q9H6X4 195 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 ARHGAP28Q9P2N2 729 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 PRG3Q9Y2Y8 225 aaPredicted RBP15.28■□□□□ 0.04
VARS-225ENST00000482996 CLIC4Q9Y696 253 aa15.28■□□□□ 0.04
VARS-225ENST00000482996 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.04
VARS-225ENST00000482996 C2orf71A6NGG8 1288 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 MBTPS2O43462 519 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 GLP2RO95838 553 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 CTSAP10619 480 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 PLS3P13797 630 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 MARCKSP29966 332 aaPredicted RBP15.27■□□□□ 0.04
VARS-225ENST00000482996 DSC1Q08554 894 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 RAD51AP2Q09MP3 1159 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 GRIK3Q13003 919 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 NT5DC1Q5TFE4 455 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 EEF1DP3Q658K8 133 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 FAM178BQ8IXR5 827 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 BCL7CQ8WUZ0 217 aaPredicted RBP15.27■□□□□ 0.04
VARS-225ENST00000482996 SPIRE2Q8WWL2 714 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 MSLNLQ96KJ4 702 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 MRPL4Q9BYD3 311 aaKnown RBP15.27■□□□□ 0.04
VARS-225ENST00000482996 MIOSQ9NXC5 875 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 SNTG2Q9NY99 539 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 KLK14Q9P0G3 267 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 CLEC1BQ9P126 229 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 PRKAG3Q9UGI9 489 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 BARX2Q9UMQ3 279 aaPredicted RBP15.27■□□□□ 0.04
VARS-225ENST00000482996 USP20Q9Y2K6 914 aa15.27■□□□□ 0.04
VARS-225ENST00000482996 SFI1A8K8P3 1242 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 H0YCG3 227 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 RECQL4O94761 1208 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 EDN1P05305 212 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 PDIA4P13667 645 aaKnown RBP15.26■□□□□ 0.03
VARS-225ENST00000482996 PLCG1P19174 1290 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 SSTR3P32745 418 aaPredicted RBP15.26■□□□□ 0.03
VARS-225ENST00000482996 TXLNAP40222 546 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 CEBPZQ03701 1054 aaKnown RBP15.26■□□□□ 0.03
VARS-225ENST00000482996 GRIN1Q05586 938 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 STRN3Q13033 797 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 COASYQ13057 564 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 DHX8Q14562 1220 aaKnown RBP15.26■□□□□ 0.03
VARS-225ENST00000482996 KARSQ15046 597 aaKnown RBP15.26■□□□□ 0.03
VARS-225ENST00000482996 PTPAQ15257 358 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 SMAD2Q15796 467 aaKnown RBP15.26■□□□□ 0.03
VARS-225ENST00000482996 LLGL2Q6P1M3 1020 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 FAM173BQ6P4H8 233 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 GPBP1Q86WP2 473 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 NTPCRQ9BSD7 190 aaKnown RBP15.26■□□□□ 0.03
VARS-225ENST00000482996 COLEC11Q9BWP8 271 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 CCSER1Q9C0I3 900 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 LARSQ9P2J5 1176 aaKnown RBP15.26■□□□□ 0.03
VARS-225ENST00000482996 CCDC39Q9UFE4 941 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 TNFSF13BQ9Y275 285 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 SRPRBQ9Y5M8 271 aaKnown RBP15.26■□□□□ 0.03
VARS-225ENST00000482996 IRAK3Q9Y616 596 aa15.26■□□□□ 0.03
VARS-225ENST00000482996 MUC3AQ02505 3323 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 SLC16A4O15374 487 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 KRT18P05783 430 aaKnown RBP15.25■□□□□ 0.03
VARS-225ENST00000482996 TMEM184AQ6ZMB5 413 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 GJD3Q8N144 294 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 SMRP1Q8NCR6 262 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 GSTCDQ8NEC7 633 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 VN1R2Q8NFZ6 395 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 AUTS2Q8WXX7 1259 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 RAD54LQ92698 747 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 CASP10Q92851 521 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 POP1Q99575 1024 aaKnown RBP15.25■□□□□ 0.03
VARS-225ENST00000482996 ACO2Q99798 780 aaKnown RBP15.25■□□□□ 0.03
VARS-225ENST00000482996 FBXO2Q9UK22 296 aaPredicted RBP15.25■□□□□ 0.03
VARS-225ENST00000482996 ODF2LQ9ULJ1 636 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 SSX2IPQ9Y2D8 614 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 GDAQ9Y2T3 454 aa15.25■□□□□ 0.03
VARS-225ENST00000482996 NPHP3-ACAD11A0A0J9YXS1 232 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 CLASP2O75122 1294 aaKnown RBP15.24■□□□□ 0.03
VARS-225ENST00000482996 FAM13AO94988 1023 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 SOD2P04179 222 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 URODP06132 367 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 THP07101 528 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 HOXB8P17481 243 aaPredicted RBP15.24■□□□□ 0.03
VARS-225ENST00000482996 RBM10P98175 930 aaKnown RBP15.24■□□□□ 0.03
VARS-225ENST00000482996 TUSC3Q13454 348 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 MCM6Q14566 821 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 SLC39A14Q15043 492 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 ZNF568Q3ZCX4 644 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 ARSHQ5FYA8 562 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 ANKRD54Q6NXT1 300 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 TAS1R3Q7RTX0 852 aa15.24■□□□□ 0.03
VARS-225ENST00000482996 PPFIBP1Q86W92 1011 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms