RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 H0Y3Z8 333 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 LIN7AO14910 233 aaPredicted RBP13.32□□□□□ -0.28
CCDC78-213ENST00000482878 CHMP2AO43633 222 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 GBP1P32455 592 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 MSH2P43246 934 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 NCALDP61601 193 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 ARHGAP44Q17R89 818 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 ERMARDQ5T6L9 678 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 FBXO11Q86XK2 927 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 LMCD1Q9NZU5 365 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 NYAP2Q9P242 653 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 TRIM33Q9UPN9 1127 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 SNX24Q9Y343 169 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 DAAM1Q9Y4D1 1078 aa13.32□□□□□ -0.28
CCDC78-213ENST00000482878 BTAF1O14981 1849 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 DDTLA6NHG4 134 aaPredicted RBP13.31□□□□□ -0.28
CCDC78-213ENST00000482878 A6NHS1 94 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 F5H6K3 240 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 CIITAP33076 1130 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 GCLCP48506 637 aaPredicted RBP13.31□□□□□ -0.28
CCDC78-213ENST00000482878 CYP2J2P51589 502 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 RAD23BP54727 409 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 PLTPP55058 493 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 KLRC3Q07444 240 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 CERKLQ49MI3 558 aaPredicted RBP13.31□□□□□ -0.28
CCDC78-213ENST00000482878 UBAP2Q5T6F2 1119 aaKnown RBP13.31□□□□□ -0.28
CCDC78-213ENST00000482878 C1orf186Q6ZWK4 172 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 TPH2Q8IWU9 490 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 FIZ1Q96SL8 496 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 HSD17B14Q9BPX1 270 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 DLGAP2Q9P1A6 1054 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 EIF3DO15371 548 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCDC78-213ENST00000482878 LRRN2O75325 713 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 SLITRK3O94933 977 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 ITIH4Q14624 930 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 GORASP1Q9BQQ3 440 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 INTS2Q9H0H0 1204 aaKnown RBP13.31□□□□□ -0.28
CCDC78-213ENST00000482878 TDRD3Q9H7E2 651 aaKnown RBP13.31□□□□□ -0.28
CCDC78-213ENST00000482878 BCS1LQ9Y276 419 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 FRMPD4Q14CM0 1322 aa13.31□□□□□ -0.28
CCDC78-213ENST00000482878 RNF8O76064 485 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 GAP43P17677 238 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 EIF3BP55884 814 aaKnown RBP13.3□□□□□ -0.28
CCDC78-213ENST00000482878 PHLDB3Q6NSJ2 640 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 ZDHHC24Q6UX98 284 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 HOOK3Q86VS8 718 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 JAMLQ86YT9 394 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 TEX9Q8N6V9 391 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 FAM81AQ8TBF8 368 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 FBXO25Q8TCJ0 367 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 TEKT1Q969V4 418 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 RNF25Q96BH1 459 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-213ENST00000482878 DYDC2Q96IM9 177 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 APEX2Q9UBZ4 518 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 FOSP01100 380 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-213ENST00000482878 VCAM1P19320 739 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 TNFAIP3P21580 790 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 MIGA2Q7L4E1 593 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 C18orf8Q96DM3 657 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 DIS3Q9Y2L1 958 aaKnown RBP13.3□□□□□ -0.28
CCDC78-213ENST00000482878 IGLV3-22A0A075B6J6 115 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 FOXN3O00409 490 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-213ENST00000482878 RGS16O15492 202 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-213ENST00000482878 SETSIPP0DME0 302 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 ALDH3A1P30838 453 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 SLCO1A2P46721 670 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 TUBP50607 506 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 PMS2P54278 862 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 SESN3P58005 492 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 SLC15A2Q16348 729 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 TBC1D10BQ4KMP7 808 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-213ENST00000482878 KIAA1755Q5JYT7 1200 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 GALNT15Q8N3T1 639 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 RDH13Q8NBN7 331 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 RPS6KC1Q96S38 1066 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
CCDC78-213ENST00000482878 PARVGQ9HBI0 331 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.3□□□□□ -0.284e-20■■■■■ 173.9
CCDC78-213ENST00000482878 AGPAT3Q9NRZ7 376 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 CHORDC1Q9UHD1 332 aaPredicted RBP13.3□□□□□ -0.28
CCDC78-213ENST00000482878 ALG6Q9Y672 507 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 STK24Q9Y6E0 443 aa13.3□□□□□ -0.28
CCDC78-213ENST00000482878 ANKRD62A6NC57 917 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 KIAA0391O15091 583 aaKnown RBP13.29□□□□□ -0.28
CCDC78-213ENST00000482878 NDUFB10O96000 172 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 RFC5P40937 340 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 MARCKSL1P49006 195 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 MAPK7Q13164 816 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 HHIPL2Q6UWX4 724 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 OTOP1Q7RTM1 612 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 ZNF720Q7Z2F6 126 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 SP8Q8IXZ3 490 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 SLC20A1Q8WUM9 679 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 KRT35Q92764 455 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 WDR18Q9BV38 432 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 ADAM22Q9P0K1 906 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 NUDT17P0C025 328 aa13.29□□□□□ -0.28
CCDC78-213ENST00000482878 KRT13P13646 458 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms