RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 MROH7Q68CQ1 1323 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 ADGRA3Q8IWK6 1321 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 EP400Q96L91 3159 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 TMEM110-MUSTN1A8MSY1 372 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 CYP11B2P19099 503 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 TNFAIP3P21580 790 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 FOXN2P32314 431 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 MARCKSL1P49006 195 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 CASP5P51878 434 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 CTTNQ14247 550 aaKnown RBP11.82□□□□□ -0.52
RPGR-208ENST00000482855 LRRC23Q53EV4 343 aaPredicted RBP11.82□□□□□ -0.52
RPGR-208ENST00000482855 ZDHHC14Q8IZN3 488 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 SLC35C1Q96A29 364 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 SLC7A6OSQ96CW6 309 aaPredicted RBP11.82□□□□□ -0.52
RPGR-208ENST00000482855 IFT43Q96FT9 208 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 LRRC4BQ9NT99 713 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 TBK1Q9UHD2 729 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 DDX25Q9UHL0 483 aaKnown RBP11.82□□□□□ -0.52
RPGR-208ENST00000482855 PCDHA12Q9UN75 941 aa11.82□□□□□ -0.52
RPGR-208ENST00000482855 A0A1B0GVG6 124 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 GTPBP10A4D1E9 387 aaKnown RBP11.81□□□□□ -0.52
RPGR-208ENST00000482855 EDIL3O43854 480 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 ECEL1O95672 775 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 RASA1P20936 1047 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 IL6STP40189 918 aaPredicted RBP11.81□□□□□ -0.52
RPGR-208ENST00000482855 RANBP1P43487 201 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 KCNJ1P48048 391 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 ZRSR2Q15696 482 aaKnown RBP11.81□□□□□ -0.52
RPGR-208ENST00000482855 HYIQ5T013 277 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 ARMC3Q5W041 872 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 C11orf63Q6NUN7 778 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 PTF1AQ7RTS3 328 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 FAM81AQ8TBF8 368 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 GJA10Q969M2 543 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 DTNBP1Q96EV8 351 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 RBM41Q96IZ5 413 aaKnown RBP11.81□□□□□ -0.52
RPGR-208ENST00000482855 MXD3Q9BW11 206 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 THAP12O43422 761 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 TTC4O95801 387 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 KCNA3P22001 575 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 RPL13P26373 211 aaKnown RBP11.81□□□□□ -0.52
RPGR-208ENST00000482855 MARK3P27448 753 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 PRDX5P30044 214 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 DRAP1Q14919 205 aaPredicted RBP11.81□□□□□ -0.52
RPGR-208ENST00000482855 TNIP1Q15025 636 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 CYP1B1Q16678 543 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 SEPT14Q6ZU15 432 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 MIGA2Q7L4E1 593 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 SH3RF3Q8TEJ3 882 aaPredicted RBP11.81□□□□□ -0.52
RPGR-208ENST00000482855 MAIP1Q8WWC4 291 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 STK33Q9BYT3 514 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 AAASQ9NRG9 546 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 WHRNQ9P202 907 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 CCNL1Q9UK58 526 aaPredicted RBP11.81□□□□□ -0.52
RPGR-208ENST00000482855 PHTF1Q9UMS5 762 aa11.81□□□□□ -0.52
RPGR-208ENST00000482855 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 POTECB2RU33 542 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 PDXKO00764 312 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 SLC16A3O15427 465 aaKnown RBP11.8□□□□□ -0.52
RPGR-208ENST00000482855 NR3C1P04150 777 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 SPTY2D1Q68D10 685 aaPredicted RBP11.8□□□□□ -0.52
RPGR-208ENST00000482855 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 EPM2AIP1Q7L775 607 aaPredicted RBP11.8□□□□□ -0.52
RPGR-208ENST00000482855 ZC3H18Q86VM9 953 aaKnown RBP11.8□□□□□ -0.52
RPGR-208ENST00000482855 CYP4X1Q8N118 509 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 SLC44A5Q8NCS7 719 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 PHC3Q8NDX5 983 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 C7orf43Q8WVR3 580 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 HAS1Q92839 578 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 SPON1Q9HCB6 807 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 PCMTD2Q9NV79 361 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 TAS2R14Q9NYV8 317 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 DNAJC12Q9UKB3 198 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 ARFGEF1Q9Y6D6 1849 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 hCG_1984214I3L0E3 225 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 ATP9AO75110 1047 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 CDH16O75309 829 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 CBX6O95503 412 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 T-ENOLP0DO92 83 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 CASP4P49662 377 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 CACNA2D1P54289 1103 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 SIK1P57059 783 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 DNAJC3Q13217 504 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 KYNUQ16719 465 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 SNX30Q5VWJ9 437 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 ANKRD35Q8N283 1001 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 ZNF713Q8N859 430 aaPredicted RBP11.8□□□□□ -0.52
RPGR-208ENST00000482855 CFAP61Q8NHU2 1237 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 COA7Q96BR5 231 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 LGALS13Q9UHV8 139 aa11.8□□□□□ -0.52
RPGR-208ENST00000482855 TCRBV7S2A1N4TA0A589 114 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 FAM47DPA6NHR8 397 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 TRAFD1O14545 582 aaPredicted RBP11.79□□□□□ -0.52
RPGR-208ENST00000482855 ECE2O60344 883 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 TCEA3O75764 348 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 SMARCA1P28370 1054 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 PTPN4P29074 926 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 CHKAP35790 457 aa11.79□□□□□ -0.52
RPGR-208ENST00000482855 HADHBP55084 474 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms