RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 MRPL17Q9NRX2 175 aaKnown RBP12.85□□□□□ -0.35
GARNL3-217ENST00000481875 ANKEF1Q9NU02 776 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 DPP7Q9UHL4 492 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 CDH22Q9UJ99 828 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 FAN1Q9Y2M0 1017 aa12.85□□□□□ -0.35
GARNL3-217ENST00000481875 NRP1O14786 923 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 DGAT1O75907 488 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 BAG4O95429 457 aaKnown RBP12.84□□□□□ -0.35
GARNL3-217ENST00000481875 AFF1P51825 1210 aaKnown RBP12.84□□□□□ -0.35
GARNL3-217ENST00000481875 GNL2Q13823 731 aaKnown RBP12.84□□□□□ -0.35
GARNL3-217ENST00000481875 KIAA0319Q5VV43 1072 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 MCTP1Q6DN14 999 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 NOTUMQ6P988 496 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 PIK3AP1Q6ZUJ8 805 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 C12orf76Q8N812 135 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-217ENST00000481875 OXER1Q8TDS5 423 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 ACSF2Q96CM8 615 aaPredicted RBP12.84□□□□□ -0.35
GARNL3-217ENST00000481875 KIF12Q96FN5 646 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 IPO9Q96P70 1041 aaKnown RBP12.84□□□□□ -0.35
GARNL3-217ENST00000481875 RPS6KC1Q96S38 1066 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 XPNPEP1Q9NQW7 623 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 LIMD1Q9UGP4 676 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 DBR1Q9UK59 544 aaKnown RBP12.84□□□□□ -0.35
GARNL3-217ENST00000481875 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 INPP5FQ9Y2H2 1132 aa12.84□□□□□ -0.35
GARNL3-217ENST00000481875 VPS37CA5D8V6 355 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-217ENST00000481875 ARL5CA6NH57 179 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 MAP3K13O43283 966 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 TSPAN1O60635 241 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 ERLIN2O94905 339 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 PDGFBP01127 241 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-217ENST00000481875 CD44P16070 742 aaKnown RBP12.83□□□□□ -0.36
GARNL3-217ENST00000481875 SYT1P21579 422 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 KLRC2P26717 231 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 KRT2P35908 639 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 ARL2P36404 184 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 NCBP1Q09161 790 aaKnown RBP12.83□□□□□ -0.36
GARNL3-217ENST00000481875 TFDP1Q14186 410 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 AMHR2Q16671 573 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 XKR9Q5GH70 373 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 EARS2Q5JPH6 523 aaKnown RBP12.83□□□□□ -0.36
GARNL3-217ENST00000481875 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-217ENST00000481875 GSTCDQ8NEC7 633 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 DYDC2Q96IM9 177 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 FAM193BQ96PV7 902 aaPredicted RBP12.83□□□□□ -0.36
GARNL3-217ENST00000481875 MTRQ99707 1265 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 HERC2P3Q9BVR0 1158 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 CSRNP2Q9H175 543 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 MARCH5Q9NX47 278 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 IGSF9Q9P2J2 1179 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 GIT1Q9Y2X7 761 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 IPPQ9Y573 584 aa12.83□□□□□ -0.36
GARNL3-217ENST00000481875 DCHS1Q96JQ0 3298 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 A0A1B0GUA9 196 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 ZBTB39O15060 712 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 ADH1AP07327 375 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 ITGA4P13612 1032 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 PDIA4P13667 645 aaKnown RBP12.82□□□□□ -0.36
GARNL3-217ENST00000481875 NBL1P41271 181 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 DSG1Q02413 1049 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 MBTD1Q05BQ5 628 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 TDGQ13569 410 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 LONRF3Q496Y0 759 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 ELMSAN1Q6PJG2 1045 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 TMC5Q6UXY8 1006 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 CCDC149Q6ZUS6 474 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 DIS3L2Q8IYB7 885 aaKnown RBP12.82□□□□□ -0.36
GARNL3-217ENST00000481875 NXPE3Q969Y0 559 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 MTMR9Q96QG7 549 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 EIF2AK1Q9BQI3 630 aaKnown RBP12.82□□□□□ -0.36
GARNL3-217ENST00000481875 GBP3Q9H0R5 595 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 PLEKHA4Q9H4M7 779 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 WDR6Q9NNW5 1121 aaKnown RBP12.82□□□□□ -0.36
GARNL3-217ENST00000481875 FNIP2Q9P278 1114 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 DOCK6Q96HP0 2047 aa12.82□□□□□ -0.36
GARNL3-217ENST00000481875 EP300Q09472 2414 aaPredicted RBP12.82□□□□□ -0.36
GARNL3-217ENST00000481875 BTBD18B2RXH4 712 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 TEX28O15482 410 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 STX6O43752 255 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 NR1I2O75469 434 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 POMCP01189 267 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 URODP06132 367 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 ASGR2P07307 311 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 WEE2P0C1S8 567 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 ARF4P18085 180 aaPredicted RBP12.81□□□□□ -0.36
GARNL3-217ENST00000481875 SP100P23497 879 aaPredicted RBP12.81□□□□□ -0.36
GARNL3-217ENST00000481875 RARRES1P49788 294 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 CTTNQ14247 550 aaKnown RBP12.81□□□□□ -0.36
GARNL3-217ENST00000481875 FAM187BQ17R55 369 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 KANK3Q6NY19 840 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 TPH2Q8IWU9 490 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 HACE1Q8IYU2 909 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 TMEM105Q8N8V8 129 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 PRIMPOLQ96LW4 560 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 GAD1Q99259 594 aa12.81□□□□□ -0.36
GARNL3-217ENST00000481875 EIF2AQ9BY44 585 aaKnown RBP12.81□□□□□ -0.36
GARNL3-217ENST00000481875 TTC12Q9H892 705 aaPredicted RBP12.81□□□□□ -0.36
GARNL3-217ENST00000481875 KCNK12Q9HB15 430 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms