RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 TMEM240Q5SV17 173 aa22.65■■□□□ 1.22
VPS16-207ENST00000481812 MRPL10Q7Z7H8 261 aaKnown RBP22.65■■□□□ 1.22
VPS16-207ENST00000481812 POMGNT1Q8WZA1 660 aa22.65■■□□□ 1.22
VPS16-207ENST00000481812 TSG101Q99816 390 aa22.65■■□□□ 1.22
VPS16-207ENST00000481812 IKZF4Q9H2S9 585 aa22.65■■□□□ 1.22
VPS16-207ENST00000481812 FAM105AQ9NUU6 356 aa22.65■■□□□ 1.22
VPS16-207ENST00000481812 DMAC2Q9NW81 257 aa22.65■■□□□ 1.22
VPS16-207ENST00000481812 RWDD2AQ9UIY3 292 aa22.65■■□□□ 1.22
VPS16-207ENST00000481812 CAPN15O75808 1086 aa22.64■■□□□ 1.21
VPS16-207ENST00000481812 EOMESO95936 686 aa22.64■■□□□ 1.21
VPS16-207ENST00000481812 ACRP10323 421 aa22.64■■□□□ 1.21
VPS16-207ENST00000481812 MAGEA10P43363 369 aaPredicted RBP22.64■■□□□ 1.21
VPS16-207ENST00000481812 ARMCX5Q6P1M9 558 aa22.64■■□□□ 1.21
VPS16-207ENST00000481812 ZNF365Q70YC5 407 aa22.64■■□□□ 1.21
VPS16-207ENST00000481812 CDR2LQ86X02 465 aaPredicted RBP22.64■■□□□ 1.21
VPS16-207ENST00000481812 NELFBQ8WX92 580 aa22.64■■□□□ 1.21
VPS16-207ENST00000481812 EIF2AQ9BY44 585 aaKnown RBP22.64■■□□□ 1.21
VPS16-207ENST00000481812 HAPLN2Q9GZV7 340 aa22.64■■□□□ 1.21
VPS16-207ENST00000481812 ELAC1Q9H777 363 aaKnown RBP22.64■■□□□ 1.21
VPS16-207ENST00000481812 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.63■■□□□ 1.21
VPS16-207ENST00000481812 TISP43B9A030 160 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 OGTO15294 1046 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 NPTXRO95502 500 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 RPL13P26373 211 aaKnown RBP22.63■■□□□ 1.21
VPS16-207ENST00000481812 MATR3P43243 847 aaKnown RBP eCLIP22.63■■□□□ 1.21
VPS16-207ENST00000481812 EPHB4P54760 987 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 MLLT1Q03111 559 aaPredicted RBP22.63■■□□□ 1.21
VPS16-207ENST00000481812 ANKRD40Q6AI12 368 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 KLHL10Q6JEL2 608 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 ECHDC2Q86YB7 292 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 ZC3H3Q8IXZ2 948 aaKnown RBP22.63■■□□□ 1.21
VPS16-207ENST00000481812 HERVK_113Q902F9 699 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.63■■□□□ 1.218e-7■■□□□ 13.2
VPS16-207ENST00000481812 ANP32EQ9BTT0 268 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 MSTO1Q9BUK6 570 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 TRIM6Q9C030 488 aaPredicted RBP22.63■■□□□ 1.21
VPS16-207ENST00000481812 KIAA1586Q9HCI6 787 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 ANKFY1Q9P2R3 1169 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 AGO2Q9UKV8 859 aaKnown RBP22.63■■□□□ 1.21
VPS16-207ENST00000481812 PCDHB2Q9Y5E7 798 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 CITO14578 2027 aa22.63■■□□□ 1.21
VPS16-207ENST00000481812 TNRC18O15417 2968 aaPredicted RBP22.62■■□□□ 1.21
VPS16-207ENST00000481812 FAM189A1O60320 539 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 CAVIN2O95810 425 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 GRM5P41594 1212 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 TTI2Q6NXR4 508 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 HACE1Q8IYU2 909 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 FBXL18Q96ME1 805 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 GDF15Q99988 308 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 CBWD1Q9BRT8 395 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 HSPBP1Q9NZL4 362 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 CTNND2Q9UQB3 1225 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 IPPQ9Y573 584 aa22.62■■□□□ 1.21
VPS16-207ENST00000481812 H0YGN5 161 aa22.61■■□□□ 1.21
VPS16-207ENST00000481812 CLIC2O15247 247 aa22.61■■□□□ 1.21
VPS16-207ENST00000481812 NR3C1P04150 777 aa22.61■■□□□ 1.21
VPS16-207ENST00000481812 PMS1P54277 932 aaKnown RBP22.61■■□□□ 1.21
VPS16-207ENST00000481812 ZNF445P59923 1031 aa22.61■■□□□ 1.21
VPS16-207ENST00000481812 FKBP3Q00688 224 aaKnown RBP22.61■■□□□ 1.21
VPS16-207ENST00000481812 ZBTB33Q86T24 672 aa22.61■■□□□ 1.21
VPS16-207ENST00000481812 ZNF598Q86UK7 904 aaKnown RBP22.61■■□□□ 1.21
VPS16-207ENST00000481812 CRIPAKQ8N1N5 446 aa22.61■■□□□ 1.21
VPS16-207ENST00000481812 XXYLT1Q8NBI6 393 aa22.61■■□□□ 1.21
VPS16-207ENST00000481812 SMG8Q8ND04 991 aaKnown RBP22.61■■□□□ 1.21
VPS16-207ENST00000481812 PGBD4Q96DM1 585 aa22.61■■□□□ 1.21
VPS16-207ENST00000481812 NAT10Q9H0A0 1025 aaKnown RBP22.61■■□□□ 1.21
VPS16-207ENST00000481812 MTIF3Q9H2K0 278 aaKnown RBP22.61■■□□□ 1.21
VPS16-207ENST00000481812 TMEM161AQ9NX61 479 aa22.61■■□□□ 1.21
VPS16-207ENST00000481812 EXTL3O43909 919 aa22.6■■□□□ 1.21
VPS16-207ENST00000481812 CLTAP09496 248 aa22.6■■□□□ 1.21
VPS16-207ENST00000481812 STAG3L1P0CL83 205 aa22.6■■□□□ 1.21
VPS16-207ENST00000481812 WDR5P61964 334 aaKnown RBP22.6■■□□□ 1.21
VPS16-207ENST00000481812 ADAM9Q13443 819 aa22.6■■□□□ 1.21
VPS16-207ENST00000481812 RASIP1Q5U651 963 aa22.6■■□□□ 1.21
VPS16-207ENST00000481812 LRSAM1Q6UWE0 723 aa22.6■■□□□ 1.21
VPS16-207ENST00000481812 GPD1LQ8N335 351 aa22.6■■□□□ 1.21
VPS16-207ENST00000481812 RSPH1Q8WYR4 309 aa22.6■■□□□ 1.21
VPS16-207ENST00000481812 DUSP9Q99956 384 aaKnown RBP22.6■■□□□ 1.21
VPS16-207ENST00000481812 BPIFA3Q9BQP9 254 aa22.6■■□□□ 1.21
VPS16-207ENST00000481812 CCDC94Q9BW85 323 aaPredicted RBP22.6■■□□□ 1.21
VPS16-207ENST00000481812 UBN1Q9NPG3 1134 aa22.6■■□□□ 1.21
VPS16-207ENST00000481812 TRIM49BA6NDI0 452 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 CETN3O15182 167 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 MAPK13O15264 365 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 AMHP03971 560 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 ATF7P17544 494 aaPredicted RBP22.59■■□□□ 1.21
VPS16-207ENST00000481812 NR2F2P24468 414 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 BMP8BP34820 402 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 ANO6Q4KMQ2 910 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 C11orf57Q6ZUT1 292 aaPredicted RBP22.59■■□□□ 1.21
VPS16-207ENST00000481812 OTOP2Q7RTS6 562 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 NPAS4Q8IUM7 802 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 THNSL1Q8IYQ7 743 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 ENOX1Q8TC92 643 aaKnown RBP22.59■■□□□ 1.21
VPS16-207ENST00000481812 CEP63Q96MT8 703 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 MED15Q96RN5 788 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 MKNK1Q9BUB5 465 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 GZF1Q9H116 711 aaPredicted RBP22.59■■□□□ 1.21
VPS16-207ENST00000481812 DNAJC25Q9H1X3 360 aa22.59■■□□□ 1.21
VPS16-207ENST00000481812 PCIF1Q9H4Z3 704 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms