RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 RDH13Q8NBN7 331 aa17.08■□□□□ 0.33
RXRA-202ENST00000481739 BSNDQ8WZ55 320 aa17.08■□□□□ 0.33
RXRA-202ENST00000481739 RNF186Q9NXI6 227 aa17.08■□□□□ 0.33
RXRA-202ENST00000481739 ZSWIM8A7E2V4 1837 aa17.08■□□□□ 0.32
RXRA-202ENST00000481739 PIGRP01833 764 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 MCM3P25205 808 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 ADSSP30520 456 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 SP3Q02447 781 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 ARHGAP1Q07960 439 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 ZNF572Q7Z3I7 529 aaPredicted RBP17.07■□□□□ 0.32
RXRA-202ENST00000481739 FAM81BQ96LP2 452 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 MFSD14AQ96MC6 490 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 PCYT2Q99447 389 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 COQ4Q9Y3A0 265 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 TISP43B9A030 160 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 SMPD1P17405 629 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 ATP4AP20648 1035 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 PPP3CAQ08209 521 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 STRN3Q13033 797 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 OLFML2BQ68BL8 750 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 KRT39Q6A163 491 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 IQSEC1Q6DN90 963 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 GPD1LQ8N335 351 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 POMGNT1Q8WZA1 660 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 CALR3Q96L12 384 aaKnown RBP17.07■□□□□ 0.32
RXRA-202ENST00000481739 TMEM8AQ9HCN3 771 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 RAB21Q9UL25 225 aa17.07■□□□□ 0.32
RXRA-202ENST00000481739 MARK3P27448 753 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 SLC26A2P50443 739 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 NAP1L1P55209 391 aaKnown RBP17.06■□□□□ 0.32
RXRA-202ENST00000481739 TNFAIP2Q03169 654 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 TARBP2Q15633 366 aaKnown RBP17.06■□□□□ 0.32
RXRA-202ENST00000481739 DUSP28Q4G0W2 176 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 SLFN12LQ6IEE8 588 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 TRIM50Q86XT4 487 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 CAGE1Q8TC20 777 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 PARD3BQ8TEW8 1205 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 HNRNPLLQ8WVV9 542 aaKnown RBP17.06■□□□□ 0.32
RXRA-202ENST00000481739 PARD6BQ9BYG5 372 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 OGFRQ9NZT2 677 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 HDAC6Q9UBN7 1215 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 AJAP1Q9UKB5 411 aaPredicted RBP17.06■□□□□ 0.32
RXRA-202ENST00000481739 STYXL1Q9Y6J8 313 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 ADGRA3Q8IWK6 1321 aa17.06■□□□□ 0.32
RXRA-202ENST00000481739 ANKRD63C9JTQ0 380 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 ERLIN1O75477 346 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 H2AFZP0C0S5 128 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 KLRC1P26715 233 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 ARL2P36404 184 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 GCLMP48507 274 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 DLG4P78352 724 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 ENOX2Q16206 610 aaKnown RBP17.05■□□□□ 0.32
RXRA-202ENST00000481739 C1orf220Q5T0J3 134 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 CCDC70Q6NSX1 233 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 GJB7Q6PEY0 223 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 H2AFVQ71UI9 128 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 DEPTORQ8TB45 409 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 AFG1LQ8WV93 481 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 LMBR1Q8WVP7 490 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 BBXQ8WY36 941 aaPredicted RBP17.05■□□□□ 0.32
RXRA-202ENST00000481739 BICD1Q96G01 975 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 JPH2Q9BR39 696 aaPredicted RBP17.05■□□□□ 0.32
RXRA-202ENST00000481739 KIFC3Q9BVG8 833 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 TMEM117Q9H0C3 514 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 TMEM134Q9H6X4 195 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 ARFGAP3Q9NP61 516 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 GABRQQ9UN88 632 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
RXRA-202ENST00000481739 LGR5O75473 907 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 ADRB2P07550 413 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 ZSCAN20P17040 1043 aaPredicted RBP17.05■□□□□ 0.32
RXRA-202ENST00000481739 FLT3LGP49771 235 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 LIG4P49917 911 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 CYP24A1Q07973 514 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 PHLDB3Q6NSJ2 640 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 SLC39A4Q6P5W5 647 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 PLPPR4Q7Z2D5 763 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 CBWD2Q8IUF1 395 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 SLC30A5Q8TAD4 765 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 RUBCNQ92622 972 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 CEP89Q96ST8 783 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 OSBPL9Q96SU4 736 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 SYT11Q9BT88 431 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 GPR88Q9GZN0 384 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 SMARCAD1Q9H4L7 1026 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 SALL4Q9UJQ4 1053 aa17.05■□□□□ 0.32
RXRA-202ENST00000481739 TARSL2A2RTX5 802 aaKnown RBP17.04■□□□□ 0.32
RXRA-202ENST00000481739 ZNF233A6NK53 670 aa17.04■□□□□ 0.32
RXRA-202ENST00000481739 CES2O00748 559 aa17.04■□□□□ 0.32
RXRA-202ENST00000481739 EXTL3O43909 919 aa17.04■□□□□ 0.32
RXRA-202ENST00000481739 LDHAP00338 332 aaKnown RBP17.04■□□□□ 0.32
RXRA-202ENST00000481739 GPC3P51654 580 aa17.04■□□□□ 0.32
RXRA-202ENST00000481739 PRKCZQ05513 592 aa17.04■□□□□ 0.32
RXRA-202ENST00000481739 GPIHBP1Q8IV16 184 aa17.04■□□□□ 0.32
RXRA-202ENST00000481739 PPTC7Q8NI37 304 aa17.04■□□□□ 0.32
RXRA-202ENST00000481739 UBE2Q2Q8WVN8 375 aa17.04■□□□□ 0.32
RXRA-202ENST00000481739 TCP11Q8WWU5 503 aa17.04■□□□□ 0.32
RXRA-202ENST00000481739 ANKZF1Q9H8Y5 726 aa17.04■□□□□ 0.32
RXRA-202ENST00000481739 DDX3XO00571 662 aaKnown RBP eCLIP17.03■□□□□ 0.324e-9■■■□□ 16.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms