RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 EPC2Q52LR7 807 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 NOMO2Q5JPE7 1267 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 CNNM4Q6P4Q7 775 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 TMEM192Q8IY95 271 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 ENGASEQ8NFI3 743 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 MYLIPQ8WY64 445 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 ZFP42Q96MM3 310 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 GAD1Q99259 594 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 CDT1Q9H211 546 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 GDAQ9Y2T3 454 aa22.32■■□□□ 1.16
CTSA-206ENST00000480961 TCHHQ07283 1943 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 TISP43B9A030 160 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 PRPF40AO75400 957 aaKnown RBP22.31■■□□□ 1.16
CTSA-206ENST00000480961 POMCP01189 267 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 MLH1P40692 756 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 MATR3P43243 847 aaKnown RBP eCLIP22.31■■□□□ 1.16
CTSA-206ENST00000480961 LIG4P49917 911 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 SNW1Q13573 536 aaKnown RBP22.31■■□□□ 1.16
CTSA-206ENST00000480961 SEZ6Q53EL9 994 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 UNC13DQ70J99 1090 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 CEP120Q8N960 986 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 STRA6Q9BX79 667 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 HAPLN2Q9GZV7 340 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 CXCL16Q9H2A7 254 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 ST6GALNAC4Q9H4F1 302 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 CWH43Q9H720 699 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 OLFML3Q9NRN5 406 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 MIOSQ9NXC5 875 aa22.31■■□□□ 1.16
CTSA-206ENST00000480961 GBF1Q92538 1859 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 ARL5CA6NH57 179 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 ANKRD63C9JTQ0 380 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 ABLIM1O14639 778 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 HNRNPDLO14979 420 aaKnown RBP22.3■■□□□ 1.16
CTSA-206ENST00000480961 GTPBP6O43824 516 aaPredicted RBP22.3■■□□□ 1.16
CTSA-206ENST00000480961 NR1I2O75469 434 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 PRPF6O94906 941 aaKnown RBP22.3■■□□□ 1.16
CTSA-206ENST00000480961 PROZP22891 400 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 BMPR1AP36894 532 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 PBX3P40426 434 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 DCAF4L1Q3SXM0 396 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 MPZL3Q6UWV2 235 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 ZPBP2Q6X784 338 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 MAP4K3Q8IVH8 894 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 THNSL1Q8IYQ7 743 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 HACE1Q8IYU2 909 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 TMEM87AQ8NBN3 555 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 SLC17A8Q8NDX2 589 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 FBXO22Q8NEZ5 403 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 GDPD5Q8WTR4 605 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 CLP1Q92989 425 aaKnown RBP22.3■■□□□ 1.16
CTSA-206ENST00000480961 GBP3Q9H0R5 595 aa22.3■■□□□ 1.16
CTSA-206ENST00000480961 KLRC4O43908 158 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 TOM1L1O75674 476 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 PPP1R37O75864 691 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 FAM160A1Q05DH4 1040 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 FAM26FQ5R3K3 315 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 SLC39A4Q6P5W5 647 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 ZNF280BQ86YH2 543 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 LRRC43Q8N309 656 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 URGCPQ8TCY9 931 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 KCNN1Q92952 543 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 UBN1Q9NPG3 1134 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 TBC1D13Q9NVG8 400 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 PCDHB13Q9Y5F0 798 aa22.29■■□□□ 1.16
CTSA-206ENST00000480961 CLDN3O15551 220 aa22.28■■□□□ 1.16
CTSA-206ENST00000480961 B4GALT3O60512 393 aa22.28■■□□□ 1.16
CTSA-206ENST00000480961 RECQL4O94761 1208 aa22.28■■□□□ 1.16
CTSA-206ENST00000480961 MCF2P10911 925 aa22.28■■□□□ 1.16
CTSA-206ENST00000480961 SCNN1GP51170 649 aa22.28■■□□□ 1.16
CTSA-206ENST00000480961 RNASELQ05823 741 aaKnown RBP22.28■■□□□ 1.16
CTSA-206ENST00000480961 ADGRE1Q14246 886 aa22.28■■□□□ 1.16
CTSA-206ENST00000480961 L1TD1Q5T7N2 865 aaKnown RBP22.28■■□□□ 1.16
CTSA-206ENST00000480961 APBB1IPQ7Z5R6 666 aaPredicted RBP22.28■■□□□ 1.16
CTSA-206ENST00000480961 ACCSQ96QU6 501 aa22.28■■□□□ 1.16
CTSA-206ENST00000480961 SLC39A2Q9NP94 309 aa22.28■■□□□ 1.16
CTSA-206ENST00000480961 GIT1Q9Y2X7 761 aa22.28■■□□□ 1.16
CTSA-206ENST00000480961 PVALEFA0A1B0GWK0 134 aa22.27■■□□□ 1.16
CTSA-206ENST00000480961 DDHD2O94830 711 aa22.27■■□□□ 1.16
CTSA-206ENST00000480961 CSPG5O95196 566 aa22.27■■□□□ 1.16
CTSA-206ENST00000480961 PIGRP01833 764 aa22.27■■□□□ 1.16
CTSA-206ENST00000480961 RPN1P04843 607 aaKnown RBP22.27■■□□□ 1.16
CTSA-206ENST00000480961 SCP2P22307 547 aa22.27■■□□□ 1.16
CTSA-206ENST00000480961 IGFBP4P22692 258 aa22.27■■□□□ 1.16
CTSA-206ENST00000480961 NOLC1Q14978 699 aaKnown RBP eCLIP22.27■■□□□ 1.16
CTSA-206ENST00000480961 KMT5BQ4FZB7 885 aa22.27■■□□□ 1.16
CTSA-206ENST00000480961 COLGALT1Q8NBJ5 622 aa22.27■■□□□ 1.16
CTSA-206ENST00000480961 SAMD11Q96NU1 681 aa22.27■■□□□ 1.16
CTSA-206ENST00000480961 MRPL9Q9BYD2 267 aaKnown RBP22.27■■□□□ 1.16
CTSA-206ENST00000480961 DNAJB4Q9UDY4 337 aa22.27■■□□□ 1.16
CTSA-206ENST00000480961 TRANK1O15050 2925 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 NT5C1B-RDH14C9J2C7 533 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 ZC3H11AO75152 810 aaKnown RBP eCLIP22.26■■□□□ 1.15
CTSA-206ENST00000480961 GRM5P41594 1212 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 MCL1Q07820 350 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 EHHADHQ08426 723 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 DPYDQ12882 1025 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 GPM6BQ13491 265 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 PNOCQ13519 176 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 ZBTB41Q5SVQ8 909 aa22.26■■□□□ 1.15
CTSA-206ENST00000480961 SYCP3Q8IZU3 236 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms