RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 LIG1P18858 919 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 GLUD2P49448 558 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 CLCN4P51793 760 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 DSC1Q08554 894 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 PADI6Q6TGC4 694 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 ASIC4Q96FT7 647 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 ZSCAN31Q96LW9 406 aaPredicted RBP16.88■□□□□ 0.29
LIMS3-203ENST00000480744 RPS6KC1Q96S38 1066 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 COLEC11Q9BWP8 271 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 PRMT7Q9NVM4 692 aaPredicted RBP16.88■□□□□ 0.29
LIMS3-203ENST00000480744 NOL7Q9UMY1 257 aaKnown RBP16.88■□□□□ 0.29
LIMS3-203ENST00000480744 SORCS3Q9UPU3 1222 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 SSX2IPQ9Y2D8 614 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 WDFY4Q6ZS81 3184 aa16.88■□□□□ 0.29
LIMS3-203ENST00000480744 A0A1B0GUA9 196 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 LILRB3O75022 631 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 ASGR2P07307 311 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 ADH1AP07327 375 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 MYBP10242 640 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 RBM25P49756 843 aaKnown RBP16.87■□□□□ 0.29
LIMS3-203ENST00000480744 HMGN5P82970 282 aaKnown RBP16.87■□□□□ 0.29
LIMS3-203ENST00000480744 ORC2Q13416 577 aaPredicted RBP16.87■□□□□ 0.29
LIMS3-203ENST00000480744 MTMR3Q13615 1198 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 IER5LQ5T953 404 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 FBXO18Q8NFZ0 1043 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 RABGGTAQ92696 567 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 MAN1C1Q9NR34 630 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 LIMD1Q9UGP4 676 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 TRIP11Q15643 1979 aa16.87■□□□□ 0.29
LIMS3-203ENST00000480744 TEX28O15482 410 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 BRD1O95696 1058 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 RPA1P27694 616 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 CCT6AP40227 531 aaKnown RBP16.86■□□□□ 0.29
LIMS3-203ENST00000480744 GRIK3Q13003 919 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 NBR1Q14596 966 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 HAUS3Q68CZ6 603 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 CDCA2Q69YH5 1023 aaPredicted RBP16.86■□□□□ 0.29
LIMS3-203ENST00000480744 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 CCDC149Q6ZUS6 474 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 GPR149Q86SP6 731 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 NOSTRINQ8IVI9 506 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 PRSS33Q8NF86 280 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 DEPTORQ8TB45 409 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 BSNDQ8WZ55 320 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 B3GALT6Q96L58 329 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 PRIMPOLQ96LW4 560 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 C2orf40Q9H1Z8 148 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 SMOC2Q9H3U7 446 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 SH2B1Q9NRF2 756 aaPredicted RBP16.86■□□□□ 0.29
LIMS3-203ENST00000480744 PIEZO1Q92508 2521 aa16.86■□□□□ 0.29
LIMS3-203ENST00000480744 N4BP3O15049 544 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 GLUD1P00367 558 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 PDGFBP01127 241 aaPredicted RBP16.85■□□□□ 0.29
LIMS3-203ENST00000480744 PRKCBP05771 671 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 CYP11B2P19099 503 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 MRE11P49959 708 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 VCPP55072 806 aaKnown RBP16.85■□□□□ 0.29
LIMS3-203ENST00000480744 PRPF4BQ13523 1007 aaKnown RBP16.85■□□□□ 0.29
LIMS3-203ENST00000480744 KIAA0319Q5VV43 1072 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 FUT10Q6P4F1 479 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 ELMSAN1Q6PJG2 1045 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 UBALD2Q8IYN6 164 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 ZDHHC14Q8IZN3 488 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 PLCD3Q8N3E9 789 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 GSTCDQ8NEC7 633 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 ACSF2Q96CM8 615 aaPredicted RBP16.85■□□□□ 0.29
LIMS3-203ENST00000480744 PDZD7Q9H5P4 517 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 POLD4Q9HCU8 107 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 CACNG4Q9UBN1 327 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 USTQ9Y2C2 406 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 USP20Q9Y2K6 914 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
LIMS3-203ENST00000480744 TTLL13PA6NNM8 815 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 SPATA31D3P0C874 917 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 PTPN5P54829 565 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 DSG1Q02413 1049 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 MAPK6Q16659 721 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 SPATA31D4Q6ZUB0 917 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 PALB2Q86YC2 1186 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 GLYCTKQ8IVS8 523 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 RNF168Q8IYW5 571 aaPredicted RBP16.84■□□□□ 0.29
LIMS3-203ENST00000480744 PRRX2Q99811 253 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 GPR62Q9BZJ7 368 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 FZD8Q9H461 694 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 SNTG2Q9NY99 539 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 LRWD1Q9UFC0 647 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 ADAM28Q9UKQ2 775 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 MYH11P35749 1972 aa16.84■□□□□ 0.29
LIMS3-203ENST00000480744 CASTOR2A6NHX0 329 aa16.83■□□□□ 0.28
LIMS3-203ENST00000480744 TADA2AO75478 443 aa16.83■□□□□ 0.28
LIMS3-203ENST00000480744 AVPR2P30518 371 aa16.83■□□□□ 0.28
LIMS3-203ENST00000480744 NAMPTP43490 491 aa16.83■□□□□ 0.28
LIMS3-203ENST00000480744 TRAPPC10P48553 1259 aa16.83■□□□□ 0.28
LIMS3-203ENST00000480744 FXR2P51116 673 aaKnown RBP eCLIP16.83■□□□□ 0.28
LIMS3-203ENST00000480744 PPP2R5AQ15172 486 aa16.83■□□□□ 0.28
LIMS3-203ENST00000480744 ECM1Q16610 540 aa16.83■□□□□ 0.28
LIMS3-203ENST00000480744 FAM187BQ17R55 369 aa16.83■□□□□ 0.28
LIMS3-203ENST00000480744 USP41Q3LFD5 358 aa16.83■□□□□ 0.28
LIMS3-203ENST00000480744 OTOP3Q7RTS5 596 aa16.83■□□□□ 0.28
LIMS3-203ENST00000480744 HASPINQ8TF76 798 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms