RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 RPGRIP1Q96KN7 1286 aa10□□□□□ -0.81
VCP-206ENST00000480327 MFSD14AQ96MC6 490 aa10□□□□□ -0.81
VCP-206ENST00000480327 PHF7Q9BWX1 381 aaPredicted RBP10□□□□□ -0.81
VCP-206ENST00000480327 C1orf112Q9NSG2 853 aa10□□□□□ -0.81
VCP-206ENST00000480327 TMEM161AQ9NX61 479 aa10□□□□□ -0.81
VCP-206ENST00000480327 HPSEQ9Y251 543 aa10□□□□□ -0.81
VCP-206ENST00000480327 MYH11P35749 1972 aa10□□□□□ -0.81
VCP-206ENST00000480327 ZFHX2Q9C0A1 2572 aaPredicted RBP9.99□□□□□ -0.81
VCP-206ENST00000480327 DENND3A2RUS2 1198 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 LRRIQ4A6NIV6 560 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 ACTN4O43707 911 aaKnown RBP9.99□□□□□ -0.81
VCP-206ENST00000480327 PDGFBP01127 241 aaPredicted RBP9.99□□□□□ -0.81
VCP-206ENST00000480327 ATF7P17544 494 aaPredicted RBP9.99□□□□□ -0.81
VCP-206ENST00000480327 LIG1P18858 919 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 CASP1P29466 404 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 PEX3P56589 373 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 PLCB3Q01970 1234 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 MAPK7Q13164 816 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 CAPSQ13938 189 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 GIT2Q14161 759 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 MXD4Q14582 209 aaPredicted RBP9.99□□□□□ -0.81
VCP-206ENST00000480327 CLLU1OSQ5K130 101 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 PLPP4Q5VZY2 271 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 ANKRD54Q6NXT1 300 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 CEP57L1Q8IYX8 460 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 DAW1Q8N136 415 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 TMEM87AQ8NBN3 555 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 DDX12PQ92771 950 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 PPP2R3CQ969Q6 453 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 PBXIP1Q96AQ6 731 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 GBP4Q96PP9 640 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 REEP2Q9BRK0 252 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 KIFC3Q9BVG8 833 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 APOL5Q9BWW9 433 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 BLZF1Q9H2G9 400 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 ELAC1Q9H777 363 aaKnown RBP9.99□□□□□ -0.81
VCP-206ENST00000480327 PCDHB12Q9Y5F1 795 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 DCHS1Q96JQ0 3298 aa9.99□□□□□ -0.81
VCP-206ENST00000480327 SPTBN4Q9H254 2564 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 FAM237AA0A1B0GTK4 181 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 CCDC169A6NNP5 214 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 GPR182O15218 404 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 ASAP2O43150 1006 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 TBCAO75347 108 aaKnown RBP9.98□□□□□ -0.81
VCP-206ENST00000480327 FAM13AO94988 1023 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 ZNF202O95125 648 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 IDEP14735 1019 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 DARSP14868 501 aaKnown RBP9.98□□□□□ -0.81
VCP-206ENST00000480327 GUCY2CP25092 1073 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 SIGLEC14Q08ET2 396 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 TFDP1Q14186 410 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 SPOUT1Q5T280 376 aaKnown RBP9.98□□□□□ -0.81
VCP-206ENST00000480327 ZNF598Q86UK7 904 aaKnown RBP9.98□□□□□ -0.81
VCP-206ENST00000480327 ZNF410Q86VK4 478 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 THNSL1Q8IYQ7 743 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 FBXL6Q8N531 539 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 MYCT1Q8N699 235 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 CNNM3Q8NE01 707 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 DEPTORQ8TB45 409 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 MICAL1Q8TDZ2 1067 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 KIFAP3Q92845 792 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 IFT74Q96LB3 600 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 DRC1Q96MC2 740 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 CDCA3Q99618 268 aaPredicted RBP9.98□□□□□ -0.81
VCP-206ENST00000480327 PYM1Q9BRP8 204 aaKnown RBP9.98□□□□□ -0.81
VCP-206ENST00000480327 GCOM2Q9BZD3 368 aaPredicted RBP9.98□□□□□ -0.81
VCP-206ENST00000480327 CUEDC2Q9H467 287 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 IFT122Q9HBG6 1241 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 KBTBD4Q9NVX7 518 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 LZTS1Q9Y250 596 aa9.98□□□□□ -0.81
VCP-206ENST00000480327 INO80B-WBP1J3KQ70 363 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 SLC16A4O15374 487 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 NR1I2O75469 434 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 SLFN14P0C7P3 912 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 PRR29P0C7W0 189 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 LAG3P18627 525 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 SP100P23497 879 aaPredicted RBP9.97□□□□□ -0.81
VCP-206ENST00000480327 EIF4BP23588 611 aaKnown RBP9.97□□□□□ -0.81
VCP-206ENST00000480327 NAMPTP43490 491 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 PHKA2P46019 1235 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 NPTX2P47972 431 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 UBE2HP62256 183 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 ASIC1P78348 528 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 CDC42EP1Q00587 391 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 AMPD3Q01432 767 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 FAM160A1Q05DH4 1040 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 DMP1Q13316 513 aaPredicted RBP9.97□□□□□ -0.81
VCP-206ENST00000480327 SNW1Q13573 536 aaKnown RBP9.97□□□□□ -0.81
VCP-206ENST00000480327 PTPN21Q16825 1174 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 ODR4Q5SWX8 454 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 LLGL2Q6P1M3 1020 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 KCNT2Q6UVM3 1135 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 KRBA2Q6ZNG9 492 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 CLEC17AQ6ZS10 378 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 ECHDC2Q86YB7 292 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 FMR1NBQ8N0W7 255 aaPredicted RBP9.97□□□□□ -0.81
VCP-206ENST00000480327 ENGASEQ8NFI3 743 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 DNAJC19Q96DA6 116 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 PAGE5Q96GU1 130 aa9.97□□□□□ -0.81
VCP-206ENST00000480327 TCF25Q9BQ70 676 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms