RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 ZNF568Q3ZCX4 644 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 MPZL3Q6UWV2 235 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 CRELD2Q6UXH1 353 aaPredicted RBP9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 HS2ST1Q7LGA3 356 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 APTXQ7Z2E3 356 aaKnown RBP9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 CBWD2Q8IUF1 395 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 SLC9A9Q8IVB4 645 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 CCDC155Q8N6L0 562 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 PLEKHO2Q8TD55 490 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 POMGNT1Q8WZA1 660 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 FAM84AQ96KN4 292 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 CNOT6LQ96LI5 555 aaKnown RBP9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 TSG101Q99816 390 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 ANP32EQ9BTT0 268 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 SRRTQ9BXP5 876 aaKnown RBP9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 EIF2AQ9BY44 585 aaKnown RBP9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 NAT10Q9H0A0 1025 aaKnown RBP9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 PADI3Q9ULW8 664 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 ST3GAL5Q9UNP4 418 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 PIN4Q9Y237 131 aaKnown RBP9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 TNFSF13BQ9Y275 285 aa9.8□□□□□ -0.84
NUDCD3-208ENST00000480209 GBF1Q92538 1859 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 TTC3P53804 2025 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 KIAA0355O15063 1070 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 TOM1L1O75674 476 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 NPTXRO95502 500 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 ACOT2P49753 483 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 PAK2Q13177 524 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 BFSP2Q13515 415 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 CEP135Q66GS9 1140 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 TMEM130Q8N3G9 435 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 GOLGA5Q8TBA6 731 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 TMEM174Q8WUU8 243 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 BORCS6Q96GS4 357 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 FBXL18Q96ME1 805 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 CXCL16Q9H2A7 254 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 NXF3Q9H4D5 531 aaKnown RBP9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 THAP9Q9H5L6 903 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 PRDM5Q9NQX1 630 aaPredicted RBP9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 TMEM39AQ9NV64 488 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 CGNQ9P2M7 1197 aaKnown RBP9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 HES2Q9Y543 173 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 PTPRJQ12913 1337 aa9.79□□□□□ -0.84
NUDCD3-208ENST00000480209 CCDC85CA6NKD9 419 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 SMTNL1A8MU46 457 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 KCNJ18B7U540 433 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 N4BP3O15049 544 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 SLC16A3O15427 465 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 CXCL10P02778 98 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 MCF2P10911 925 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 ATF7P17544 494 aaPredicted RBP9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 SNRPFP62306 86 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 FKBP3Q00688 224 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 NFX1Q12986 1120 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 ADAM9Q13443 819 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 KCNJ12Q14500 433 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 KRT31Q15323 416 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 TPD52L1Q16890 204 aaPredicted RBP9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 TMEM132AQ24JP5 1023 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 C1orf220Q5T0J3 134 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 NOTUMQ6P988 496 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 SLC27A1Q6PCB7 646 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 TRIM59Q8IWR1 403 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 C7orf61Q8IZ16 206 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 XXYLT1Q8NBI6 393 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 SMG8Q8ND04 991 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 CEP63Q96MT8 703 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 FAM213AQ9BRX8 229 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 MSTO1Q9BUK6 570 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 IFIH1Q9BYX4 1025 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 TOPORSQ9NS56 1045 aaPredicted RBP9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 INTS13Q9NVM9 706 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 AGO2Q9UKV8 859 aaKnown RBP9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 SQORQ9Y6N5 450 aa9.78□□□□□ -0.84
NUDCD3-208ENST00000480209 SCN1AP35498 2009 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 MEIS3P2A8K0S8 358 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 BECN2A8MW95 431 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 CETN3O15182 167 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 GPR182O15218 404 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 OGTO15294 1046 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 CLDN3O15551 220 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 EXTL3O43909 919 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 EXOC3O60645 756 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 TIMP1P01033 207 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 AXLP30530 894 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 MATR3P43243 847 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 MARSP56192 900 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 OSTNP61366 133 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 DLG4P78352 724 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 CYP24A1Q07973 514 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 MYBPC2Q14324 1141 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 GSE1Q14687 1217 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 PCBP1Q15365 356 aaKnown RBP eCLIP9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 ENOX2Q16206 610 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 SNRNP35Q16560 246 aaKnown RBP9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 PTPN21Q16825 1174 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 PLEKHG4Q58EX7 1191 aa9.77□□□□□ -0.85
NUDCD3-208ENST00000480209 TCP11X2Q5H9J9 407 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms