RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLDN11-205ENST00000480067 EIF2AQ9BY44 585 aaKnown RBP12.23□□□□□ -0.45
CLDN11-205ENST00000480067 MTIF3Q9H2K0 278 aaKnown RBP12.23□□□□□ -0.45
CLDN11-205ENST00000480067 SEMA6BQ9H3T3 888 aa12.23□□□□□ -0.45
CLDN11-205ENST00000480067 STYXL1Q9Y6J8 313 aa12.23□□□□□ -0.45
CLDN11-205ENST00000480067 ZMYM2Q9UBW7 1377 aa12.23□□□□□ -0.45
CLDN11-205ENST00000480067 BICDL2A1A5D9 508 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 C9IYK1 514 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 CLIC2O15247 247 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 ZNF623O75123 536 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 AMHP03971 560 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 GARTP22102 1010 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 RPL13P26373 211 aaKnown RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 KCNJ6P48051 423 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 FAM189BP81408 668 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 PAK1Q13153 545 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 CT47A1Q5JQC4 288 aaPredicted RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 UBXN11Q5T124 520 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 THNSL1Q8IYQ7 743 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 RNF169Q8NCN4 708 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 NOC3LQ8WTT2 800 aaKnown RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 LINC01599Q8WXQ3 324 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 P2RX5Q93086 422 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 CBWD1Q9BRT8 395 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 UBE2OQ9C0C9 1292 aaKnown RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 NAT10Q9H0A0 1025 aaKnown RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 CDT1Q9H211 546 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 PCIF1Q9H4Z3 704 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 AGO2Q9UKV8 859 aaKnown RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 LRFN2Q9ULH4 789 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 TRAF3IP3Q9Y228 551 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 PCDHB7Q9Y5E2 793 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 ABLIM1O14639 778 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 KIAA0391O15091 583 aaKnown RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 OGTO15294 1046 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 EOMESO95936 686 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 LDHAP00338 332 aaKnown RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 CCNE1P24864 410 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 ERCC5P28715 1186 aaPredicted RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 CYP2J2P51589 502 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 OSTNP61366 133 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 LRRC63Q05C16 580 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 HSP90AA2PQ14568 343 aaPredicted RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 KYAT1Q16773 422 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 ANKRD40Q6AI12 368 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 ECHDC2Q86YB7 292 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 HERVK_113Q902F9 699 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 PGBD4Q96DM1 585 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 CCDC94Q9BW85 323 aaPredicted RBP12.22□□□□□ -0.45
CLDN11-205ENST00000480067 HAPLN2Q9GZV7 340 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 RWDD2AQ9UIY3 292 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 CTNND2Q9UQB3 1225 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 HES2Q9Y543 173 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 IPPQ9Y573 584 aa12.22□□□□□ -0.45
CLDN11-205ENST00000480067 TANC1Q9C0D5 1861 aa12.21□□□□□ -0.45
CLDN11-205ENST00000480067 TULP1O00294 542 aaPredicted RBP12.21□□□□□ -0.46
CLDN11-205ENST00000480067 EXOC3O60645 756 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 NR3C1P04150 777 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 STAG3L1P0CL83 205 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 ITGA4P13612 1032 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 PMS1P54277 932 aaKnown RBP12.21□□□□□ -0.46
CLDN11-205ENST00000480067 STX17P56962 302 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 WDR5P61964 334 aaKnown RBP12.21□□□□□ -0.46
CLDN11-205ENST00000480067 FKBP3Q00688 224 aaKnown RBP12.21□□□□□ -0.46
CLDN11-205ENST00000480067 ADAM9Q13443 819 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 MYBPC2Q14324 1141 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 EDRF1Q3B7T1 1238 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 C12orf56Q8IXR9 622 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 XXYLT1Q8NBI6 393 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 ACAP3Q96P50 834 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 GDF15Q99988 308 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 FAM213AQ9BRX8 229 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 APOL6Q9BWW8 343 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 NXF3Q9H4D5 531 aaKnown RBP12.21□□□□□ -0.46
CLDN11-205ENST00000480067 KIAA1586Q9HCI6 787 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 TMEM161AQ9NX61 479 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 SNTG2Q9NY99 539 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 HSPBP1Q9NZL4 362 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 SLC4A7Q9Y6M7 1214 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 LAMA3Q16787 3333 aa12.21□□□□□ -0.46
CLDN11-205ENST00000480067 SCN5AQ14524 2016 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 TET1Q8NFU7 2136 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 TRIM49BA6NDI0 452 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 CETN3O15182 167 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 EXTL3O43909 919 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 UPP2O95045 317 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 CLTAP09496 248 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 NR2F2P24468 414 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 AKAP5P24588 427 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 GRM5P41594 1212 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 ACOT2P49753 483 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 YARSP54577 528 aaKnown RBP12.2□□□□□ -0.46
CLDN11-205ENST00000480067 ANO6Q4KMQ2 910 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 ZCWPW2Q504Y3 356 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 SEZ6Q53EL9 994 aa12.2□□□□□ -0.46
CLDN11-205ENST00000480067 MRPL10Q7Z7H8 261 aaKnown RBP12.2□□□□□ -0.46
CLDN11-205ENST00000480067 NPAS4Q8IUM7 802 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms