RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 TTC38Q5R3I4 469 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 ATAT1Q5SQI0 421 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 CCDC149Q6ZUS6 474 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 TAS1R1Q7RTX1 841 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 CATSPER3Q86XQ3 398 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 ZBTB8OSQ8IWT0 167 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 MCPH1Q8NEM0 835 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 ERMNQ8TAM6 284 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 RPS6KC1Q96S38 1066 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 PHOX2BQ99453 314 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 NFKBIZQ9BYH8 718 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 TUFT1Q9NNX1 390 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 MAN1C1Q9NR34 630 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 MIOSQ9NXC5 875 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 CACNG4Q9UBN1 327 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 PARP2Q9UGN5 583 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 LIMCH1Q9UPQ0 1083 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 SORCS3Q9UPU3 1222 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 GIT1Q9Y2X7 761 aa7.4□□□□□ -1.22
FN1-220ENST00000480024 TRIP11Q15643 1979 aa7.4□□□□□ -1.23
FN1-220ENST00000480024 DOCK8Q8NF50 2099 aa7.4□□□□□ -1.23
FN1-220ENST00000480024 RIF1Q5UIP0 2472 aaKnown RBP7.39□□□□□ -1.23
FN1-220ENST00000480024 VWA8A3KMH1 1905 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 MTCL1Q9Y4B5 1905 aaKnown RBP7.39□□□□□ -1.23
FN1-220ENST00000480024 ARHGEF35A5YM69 484 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 TTLL13PA6NNM8 815 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 LILRB3O75022 631 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 NR1I2O75469 434 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 GLUD1P00367 558 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 RPL17P18621 184 aaKnown RBP7.39□□□□□ -1.23
FN1-220ENST00000480024 PTPN5P54829 565 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 TCF15Q12870 199 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 GRIK3Q13003 919 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 ERICH6BQ5W0A0 696 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 HAUS3Q68CZ6 603 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 CDCA2Q69YH5 1023 aaPredicted RBP7.39□□□□□ -1.23
FN1-220ENST00000480024 FUT10Q6P4F1 479 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 PADI6Q6TGC4 694 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 PPP4R3CPQ6ZMV5 832 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 GPR149Q86SP6 731 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 NOSTRINQ8IVI9 506 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 GLYCTKQ8IVS8 523 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 UBALD2Q8IYN6 164 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 RNF168Q8IYW5 571 aaPredicted RBP7.39□□□□□ -1.23
FN1-220ENST00000480024 ZDHHC14Q8IZN3 488 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 FAM184AQ8NB25 1140 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 GSTCDQ8NEC7 633 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 DEPTORQ8TB45 409 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 HASPINQ8TF76 798 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 BSNDQ8WZ55 320 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 NACC1Q96RE7 527 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 POLR3CQ9BUI4 534 aaPredicted RBP7.39□□□□□ -1.23
FN1-220ENST00000480024 KIFC3Q9BVG8 833 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 GPR62Q9BZJ7 368 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 FOXP1Q9H334 677 aaPredicted RBP7.39□□□□□ -1.23
FN1-220ENST00000480024 PDZD7Q9H5P4 517 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 FAM86C1Q9NVL1 165 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 PRMT7Q9NVM4 692 aaPredicted RBP7.39□□□□□ -1.23
FN1-220ENST00000480024 LIMD1Q9UGP4 676 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 ADAM28Q9UKQ2 775 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 USP20Q9Y2K6 914 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 DOCK6Q96HP0 2047 aa7.39□□□□□ -1.23
FN1-220ENST00000480024 ZMYM2Q9UBW7 1377 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 CLUHO75153 1309 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 SF3B1O75533 1304 aaKnown RBP eCLIP7.38□□□□□ -1.23
FN1-220ENST00000480024 A0A1B0GUA9 196 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 CASTOR2A6NHX0 329 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 N4BP3O15049 544 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 RFPL2O75678 378 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 RECQL4O94761 1208 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 KIF4AO95239 1232 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 EFEMP2O95967 443 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 EDN1P05305 212 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 PRKCBP05771 671 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 SPATA31D3P0C874 917 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 XRCC6P12956 609 aaKnown RBP eCLIP7.38□□□□□ -1.23
FN1-220ENST00000480024 RPA1P27694 616 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 AVPR2P30518 371 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 CCT6AP40227 531 aaKnown RBP7.38□□□□□ -1.23
FN1-220ENST00000480024 NAMPTP43490 491 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 RBM25P49756 843 aaKnown RBP7.38□□□□□ -1.23
FN1-220ENST00000480024 HMGN5P82970 282 aaKnown RBP7.38□□□□□ -1.23
FN1-220ENST00000480024 DSG1Q02413 1049 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 ORC2Q13416 577 aaPredicted RBP7.38□□□□□ -1.23
FN1-220ENST00000480024 TUSC3Q13454 348 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 PRPF4BQ13523 1007 aaKnown RBP7.38□□□□□ -1.23
FN1-220ENST00000480024 HSP90AA2PQ14568 343 aaPredicted RBP7.38□□□□□ -1.23
FN1-220ENST00000480024 KIAA0319Q5VV43 1072 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 ELMSAN1Q6PJG2 1045 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 C15orf39Q6ZRI6 1047 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 SPATA31D4Q6ZUB0 917 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 OTOP3Q7RTS5 596 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 PALB2Q86YC2 1186 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 PLCD3Q8N3E9 789 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 FBXO18Q8NFZ0 1043 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 RIN2Q8WYP3 895 aaPredicted RBP7.38□□□□□ -1.23
FN1-220ENST00000480024 SMG7Q92540 1137 aaKnown RBP7.38□□□□□ -1.23
FN1-220ENST00000480024 ACSF2Q96CM8 615 aaPredicted RBP7.38□□□□□ -1.23
FN1-220ENST00000480024 PRIMPOLQ96LW4 560 aa7.38□□□□□ -1.23
FN1-220ENST00000480024 PRRX2Q99811 253 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms