RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ZNF865P0CJ78 1059 aaPredicted RBP7.39□□□□□ -1.23
USP48-208ENST00000479177 CCDC192P0DO97 292 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 CYBAP13498 195 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 CYP11B2P19099 503 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 PTGS1P23219 599 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 ADCYAP1R1P41586 468 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 FLT3LGP49771 235 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 AFF1P51825 1210 aaKnown RBP7.39□□□□□ -1.23
USP48-208ENST00000479177 NRLP54845 237 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 PRKCEQ02156 737 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 MORC3Q14149 939 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 DHX8Q14562 1220 aaKnown RBP7.39□□□□□ -1.23
USP48-208ENST00000479177 GRIK4Q16099 956 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 DUSP28Q4G0W2 176 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 TMEM63BQ5T3F8 832 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 GJC2Q5T442 439 aaPredicted RBP7.39□□□□□ -1.23
USP48-208ENST00000479177 SASS6Q6UVJ0 657 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 SV2BQ7L1I2 683 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 ZNF438Q7Z4V0 828 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 GPBP1Q86WP2 473 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 GAS2L3Q86XJ1 694 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 DHX37Q8IY37 1157 aaKnown RBP7.39□□□□□ -1.23
USP48-208ENST00000479177 C4orf19Q8IY42 314 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 SYT2Q8N9I0 419 aaPredicted RBP7.39□□□□□ -1.23
USP48-208ENST00000479177 ATP6V0A1Q93050 837 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 SMARCE1Q969G3 411 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 ERO1AQ96HE7 468 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 GSDMAQ96QA5 445 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 NACC1Q96RE7 527 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 PCYT2Q99447 389 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 GPR20Q99678 358 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 C7orf25Q9BPX7 421 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 BLZF1Q9H2G9 400 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 TSPY26PQ9H489 355 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 MLXIPQ9HAP2 919 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 ABI2Q9NYB9 513 aaPredicted RBP7.39□□□□□ -1.23
USP48-208ENST00000479177 GABBR1Q9UBS5 961 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 SRRDQ9UH36 339 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 NRBP1Q9UHY1 535 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 MAN1B1Q9UKM7 699 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 DNM3Q9UQ16 869 aa7.39□□□□□ -1.23
USP48-208ENST00000479177 BIN1O00499 593 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 NOP56O00567 594 aaKnown RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 NKRFO15226 690 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP48-208ENST00000479177 LILRB5O75023 590 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 FKTNO75072 461 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 RGS9O75916 674 aaPredicted RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 STBD1O95210 358 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 SSBP05455 408 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP48-208ENST00000479177 HOXD8P13378 290 aaPredicted RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 BMP6P22004 513 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 RARRES1P49788 294 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 NLRP12P59046 1061 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 ASIC1P78348 528 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 AMPD3Q01432 767 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 MAP2K1Q02750 393 aaPredicted RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 KCNB1Q14721 858 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 DPCR1Q3MIW9 517 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 CCDC144BQ3MJ40 725 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 HSDL1Q3SXM5 330 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 PRRT3Q5FWE3 981 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 PRAMEF19Q5SWL8 479 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 MFSD14CQ5VZR4 134 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 IQSEC1Q6DN90 963 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 SWSAP1Q6NVH7 229 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 ELMSAN1Q6PJG2 1045 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 C11orf57Q6ZUT1 292 aaPredicted RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 GLYCTKQ8IVS8 523 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 C1orf127Q8N9H9 656 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 TRIML1Q8N9V2 468 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 TRPV1Q8NER1 839 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 OR13H1Q8NG92 308 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 PPTC7Q8NI37 304 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 AFAP1L1Q8TED9 768 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 PIGOQ8TEQ8 1089 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 ZNF296Q8WUU4 475 aaPredicted RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 SEPT1Q8WYJ6 367 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 LENG1Q96BZ8 264 aaPredicted RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 DNAJC19Q96DA6 116 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 SPATA33Q96N06 139 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 RUSC1Q9BVN2 902 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 LRRC27Q9C0I9 530 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 SMG9Q9H0W8 520 aaKnown RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 BHMT2Q9H2M3 363 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 PRDM6Q9NQX0 595 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 ZNF302Q9NR11 478 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 ANO10Q9NW15 660 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 KANSL3Q9P2N6 904 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 EGFL7Q9UHF1 273 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 DBR1Q9UK59 544 aaKnown RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 GNEQ9Y223 722 aaKnown RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 FNDC3AQ9Y2H6 1198 aaKnown RBP7.38□□□□□ -1.23
USP48-208ENST00000479177 MYH11P35749 1972 aa7.38□□□□□ -1.23
USP48-208ENST00000479177 FRMPD3Q5JV73 1810 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 NPHP3-ACAD11A0A0J9YXS1 232 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 PVALEFA0A1B0GWK0 134 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 FSD2A1L4K1 749 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 FRMD3A2A2Y4 597 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 ARHGEF35A5YM69 484 aa7.37□□□□□ -1.23
USP48-208ENST00000479177 TMEM150BA6NC51 233 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms