RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SPDYE16A6NNV3 312 aaPredicted RBP22.65■■□□□ 1.22
SDF4-206ENST00000478938 ATP9BO43861 1147 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 ABCB4P21439 1286 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 CALML3P27482 149 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 CHRNA3P32297 505 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 MLH1P40692 756 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 IFIT5Q13325 482 aaKnown RBP22.65■■□□□ 1.22
SDF4-206ENST00000478938 KYNUQ16719 465 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 TRIM59Q8IWR1 403 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 SLF2Q8IX21 1173 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 VPS52Q8N1B4 723 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 GRID1Q9ULK0 1009 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 PODXLO00592 558 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 NMT2O60551 498 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 EDF1O60869 148 aaKnown RBP22.65■■□□□ 1.22
SDF4-206ENST00000478938 OXCT1P55809 520 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 CDC16Q13042 620 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 TMEM63BQ5T3F8 832 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 NPHS2Q9NP85 383 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 NAALADL1Q9UQQ1 740 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 TBX22Q9Y458 520 aa22.65■■□□□ 1.22
SDF4-206ENST00000478938 TRIM43BA6NCK2 446 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 USP1O94782 785 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 KCNJ1P48048 391 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 TMEM259Q4ZIN3 620 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 SYDE2Q5VT97 1194 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 RINLQ6ZS11 566 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 PALB2Q86YC2 1186 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 C7orf43Q8WVR3 580 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 ZNF512BQ96KM6 892 aaPredicted RBP22.64■■□□□ 1.22
SDF4-206ENST00000478938 SAR1AQ9NR31 198 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 BLOC1S4Q9NUP1 217 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 AJAP1Q9UKB5 411 aaPredicted RBP22.64■■□□□ 1.22
SDF4-206ENST00000478938 PCDHA6Q9UN73 950 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 PCDHA8Q9Y5H6 950 aa22.64■■□□□ 1.22
SDF4-206ENST00000478938 CFAP69A5D8W1 941 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 FAM47DPA6NHR8 397 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 PLSCR1O15162 318 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 MAGEB2O15479 319 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 ZNF862O60290 1169 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 CDK4P11802 303 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 UCHL3P15374 230 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 TXKP42681 527 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 NPEPPSP55786 919 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 CCDC92Q53HC0 331 aaPredicted RBP22.64■■□□□ 1.21
SDF4-206ENST00000478938 LDHAL6AQ6ZMR3 332 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 SLC15A3Q8IY34 581 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 TAOK3Q9H2K8 898 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 PTTG2Q9NZH5 202 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 PCYOX1Q9UHG3 505 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 ANGPTL2Q9UKU9 493 aa22.64■■□□□ 1.21
SDF4-206ENST00000478938 CALM1P0DP23 149 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 CALM2P0DP24 149 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 CALM3P0DP25 149 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 MARCKSL1P49006 195 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 SLC45A4Q5BKX6 768 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 CCDC105Q8IYK2 499 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 CTNNBL1Q8WYA6 563 aaPredicted RBP22.63■■□□□ 1.21
SDF4-206ENST00000478938 CYTH2Q99418 400 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 BRD8Q9H0E9 1235 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 IRS4O14654 1257 aaPredicted RBP22.63■■□□□ 1.21
SDF4-206ENST00000478938 OR52Z1P0C646 297 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 CD97P48960 835 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 GPSM2P81274 684 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 MYOCDQ8IZQ8 938 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 PROM2Q8N271 834 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 PTCD3Q96EY7 689 aaKnown RBP22.63■■□□□ 1.21
SDF4-206ENST00000478938 PRR11Q96HE9 360 aaPredicted RBP22.63■■□□□ 1.21
SDF4-206ENST00000478938 FGFBP2Q9BYJ0 223 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 TBC1D7Q9P0N9 293 aa22.63■■□□□ 1.21
SDF4-206ENST00000478938 DIS3Q9Y2L1 958 aaKnown RBP22.63■■□□□ 1.21
SDF4-206ENST00000478938 A0A1W2PRG0 241 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 TCRBV7S2A1N4TA0A589 114 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 PGM3O95394 542 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 ANPEPP15144 967 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 VPS41P49754 854 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 SLC4A8Q2Y0W8 1093 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 PLEKHG4Q58EX7 1191 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 MARCH10Q8NA82 808 aaPredicted RBP22.62■■□□□ 1.21
SDF4-206ENST00000478938 AK8Q96MA6 479 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 PHF12Q96QT6 1004 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 RIC8AQ9NPQ8 531 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 SUN2Q9UH99 717 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 DCTN4Q9UJW0 460 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 PVALEFA0A1B0GWK0 134 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 RASA4BC9J798 803 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 RASA4O43374 803 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 DDAH1O94760 285 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 ALAS1P13196 640 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 EMP3P54852 163 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 MAP3K10Q02779 954 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 TMED2Q15363 201 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 PPP2R3CQ969Q6 453 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 PPP1R14BQ96C90 147 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 FAM89AQ96GI7 184 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 SMC6Q96SB8 1091 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 PFDN4Q9NQP4 134 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 ZNF180Q9UJW8 692 aa22.62■■□□□ 1.21
SDF4-206ENST00000478938 POTEFA5A3E0 1075 aa22.61■■□□□ 1.21
SDF4-206ENST00000478938 CSF1RP07333 972 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms