RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 OTUD6BQ8N6M0 293 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 FBXO25Q8TCJ0 367 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 NUP85Q9BW27 656 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 CARD9Q9H257 536 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 EPB41L4BQ9H329 900 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 TRPC6Q9Y210 931 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 CAND2O75155 1236 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 RGS20O76081 388 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 CCDC172P0C7W6 258 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 CYP11B1P15538 503 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 PEX5P50542 639 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 NCKAP1LP55160 1127 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 PSMC5P62195 406 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 MAP3K10Q02779 954 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 IFFO1Q0D2I5 559 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 DUPD1Q68J44 220 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 SWSAP1Q6NVH7 229 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 ZDHHC24Q6UX98 284 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 CYFIP1Q7L576 1253 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 MCF2L2Q86YR7 1114 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 NEK9Q8TD19 979 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 HELQQ8TDG4 1101 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 PARD3BQ8TEW8 1205 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 SEC14L1Q92503 715 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 CEP170P1Q96L14 293 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 ERP44Q9BS26 406 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 ZDHHC18Q9NUE0 388 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 DAAM1Q9Y4D1 1078 aa11.63□□□□□ -0.55
VPS52-217ENST00000478934 H0YHG0 523 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 CFHP08603 1231 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 RXRBP28702 533 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 PTGIRP43119 386 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 SLCO1A2P46721 670 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 CETN1Q12798 172 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 FSTL1Q12841 308 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 FKBP1CQ5VVH2 108 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 KCNV1Q6PIU1 500 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 C4orf19Q8IY42 314 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 POMGNT1Q8WZA1 660 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 LRRC45Q96CN5 670 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 FMO2Q99518 471 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 ZSWIM1Q9BR11 485 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 FAM213AQ9BRX8 229 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 KMT5AQ9NQR1 393 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 RNF146Q9NTX7 359 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 TBC1D22BQ9NU19 505 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 PPP1R1BQ9UD71 204 aaPredicted RBP11.62□□□□□ -0.55
VPS52-217ENST00000478934 PNMA2Q9UL42 364 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 TTC7AQ9ULT0 858 aaPredicted RBP11.62□□□□□ -0.55
VPS52-217ENST00000478934 CTDP1Q9Y5B0 961 aaPredicted RBP11.62□□□□□ -0.55
VPS52-217ENST00000478934 VWA5AO00534 786 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 KIAA0391O15091 583 aaKnown RBP11.62□□□□□ -0.55
VPS52-217ENST00000478934 RTN2O75298 545 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 KIAA0754O94854 1291 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 KRT5P13647 590 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 RPL21P46778 160 aaKnown RBP11.62□□□□□ -0.55
VPS52-217ENST00000478934 PDE4CQ08493 712 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 SPOPLQ6IQ16 392 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 DLK2Q6UY11 383 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 SV2AQ7L0J3 742 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 AGBL3Q8NEM8 1001 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 ZNF516Q92618 1163 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 RNF25Q96BH1 459 aaPredicted RBP11.62□□□□□ -0.55
VPS52-217ENST00000478934 ZNF653Q96CK0 615 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 CYFIP2Q96F07 1278 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 FAM118BQ9BPY3 351 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 KIAA1683Q9H0B3 1180 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 SLC12A6Q9UHW9 1150 aa11.62□□□□□ -0.55
VPS52-217ENST00000478934 WDR64B1ANS9 1081 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 O00370 1275 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 MEFVO15553 781 aaPredicted RBP11.61□□□□□ -0.55
VPS52-217ENST00000478934 NR3C2P08235 984 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 IBSPP21815 317 aaPredicted RBP11.61□□□□□ -0.55
VPS52-217ENST00000478934 SNX1Q13596 522 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 CIAPIN1Q6FI81 312 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 TAS1R3Q7RTX0 852 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 RHOT2Q8IXI1 618 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 MTMR14Q8NCE2 650 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 ZNF564Q8TBZ8 553 aaPredicted RBP11.61□□□□□ -0.55
VPS52-217ENST00000478934 ZNF526Q8TF50 670 aaPredicted RBP11.61□□□□□ -0.55
VPS52-217ENST00000478934 HERPUD2Q9BSE4 406 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 SEMA4AQ9H3S1 761 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 GRHL1Q9NZI5 618 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 ZNFX1Q9P2E3 1918 aaKnown RBP11.61□□□□□ -0.55
VPS52-217ENST00000478934 FOXO6A8MYZ6 492 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 SPOPO43791 374 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 GRIN3BO60391 1043 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 STBD1O95210 358 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 LYPLA2O95372 231 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 RARAP10276 462 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 FGFR4P22455 802 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 DMP1Q13316 513 aaPredicted RBP11.61□□□□□ -0.55
VPS52-217ENST00000478934 MYBPC2Q14324 1141 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 SEZ6Q53EL9 994 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 KRT39Q6A163 491 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 LRIG3Q6UXM1 1119 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 NIPA1Q7RTP0 329 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 CCDC60Q8IWA6 550 aaPredicted RBP11.61□□□□□ -0.55
VPS52-217ENST00000478934 C12orf56Q8IXR9 622 aa11.61□□□□□ -0.55
VPS52-217ENST00000478934 C1orf54Q8WWF1 131 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms