RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 TLR9Q9NR96 1032 aa4.32□□□□□ -1.72
SUPT20H-215ENST00000478911 DDX20Q9UHI6 824 aaKnown RBP4.32□□□□□ -1.72
SUPT20H-215ENST00000478911 RCAN3Q9UKA8 241 aa4.32□□□□□ -1.72
SUPT20H-215ENST00000478911 FAM184BQ9ULE4 1060 aa4.32□□□□□ -1.72
SUPT20H-215ENST00000478911 RBM8AQ9Y5S9 174 aaKnown RBP4.32□□□□□ -1.72
SUPT20H-215ENST00000478911 MTSS1O43312 755 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 CAND2O75155 1236 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 ECHS1P30084 290 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 ADSLP30566 484 aaPredicted RBP4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 MAGEA10P43363 369 aaPredicted RBP4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 KIR2DL3P43628 341 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 SLC6A9P48067 706 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 SLURP1P55000 103 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 WNT3AP56704 352 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 DSC2Q02487 901 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 HGFACQ04756 655 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 NFYCQ13952 458 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 PGS1Q32NB8 556 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 FAM180AQ6UWF9 173 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 USP30Q70CQ3 517 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 LILRA3Q8N6C8 439 aaPredicted RBP4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 SLC16A11Q8NCK7 471 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 ZNF480Q8WV37 535 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 GCDHQ92947 438 aaPredicted RBP4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 KAT5Q92993 513 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 TIFAQ96CG3 184 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 C1GALT1C1Q96EU7 318 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 ACO2Q99798 780 aaKnown RBP4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 C7orf25Q9BPX7 421 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 PCGF6Q9BYE7 350 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 C1orf112Q9NSG2 853 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 USP40Q9NVE5 1235 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 SLC52A1Q9NWF4 448 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 ING3Q9NXR8 418 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 ZDHHC9Q9Y397 364 aa4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 CFAP20Q9Y6A4 193 aaKnown RBP4.31□□□□□ -1.72
SUPT20H-215ENST00000478911 MROH6A6NGR9 719 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 H3BML4 177 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 MATN3O15232 486 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 ARHGAP6O43182 974 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 CTNND1O60716 968 aaKnown RBP4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 TOX4O94842 621 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 ENDOD1O94919 500 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 ADCY7P51828 1080 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 BPIFB4P59827 614 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 ADAM8P78325 824 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 ADAM17P78536 824 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 ATP2C1P98194 919 aaPredicted RBP4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 GALEQ14376 348 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 DENND1CQ8IV53 801 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 KBTBD2Q8IY47 623 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 ZBTB34Q8NCN2 500 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 OR14K1Q8NGZ2 314 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 FAM193BQ96PV7 902 aaPredicted RBP4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 SLC6A15Q9H2J7 730 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 BCO1Q9HAY6 547 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 JADE2Q9NQC1 790 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 TRPS1Q9UHF7 1281 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 SIK3Q9Y2K2 1263 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 PCDHA13Q9Y5I0 950 aa4.3□□□□□ -1.72
SUPT20H-215ENST00000478911 FRMPD2Q68DX3 1309 aaPredicted RBP4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 A6NNZ2 444 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 SGTAO43765 313 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 NOBOXO60393 691 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 B4GALT3O60512 393 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 MAP4K4O95819 1239 aaPredicted RBP4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 FSHBP01225 129 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 ALDH2P05091 517 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 KRT18P05783 430 aaKnown RBP4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 VSIG10L2P0DP72 767 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 MYBP10242 640 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 SREBF1P36956 1147 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 ACAP1Q15027 740 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 RNF151Q2KHN1 245 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 MAP9Q49MG5 647 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 GAGE13Q4V321 117 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 PPP4R3AQ6IN85 833 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 CYB5RLQ6IPT4 315 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 SLC4A10Q6U841 1118 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 OVCH2Q7RTZ1 564 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 RHOT1Q8IXI2 618 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 ANKRD53Q8N9V6 530 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 OR7D4Q8NG98 312 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 PPP1R35Q8TAP8 253 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 NSUN6Q8TEA1 469 aaKnown RBP4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 CFHR4Q92496 578 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 PDCD2LQ9BRP1 358 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 ARNT2Q9HBZ2 717 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 GPRC5DQ9NZD1 345 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 NR2E1Q9Y466 385 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 PCDHB1Q9Y5F3 818 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 SLC4A7Q9Y6M7 1214 aa4.29□□□□□ -1.72
SUPT20H-215ENST00000478911 MATN2O00339 956 aa4.28□□□□□ -1.72
SUPT20H-215ENST00000478911 ADCY6O43306 1168 aa4.28□□□□□ -1.72
SUPT20H-215ENST00000478911 B3GALT2O43825 422 aa4.28□□□□□ -1.72
SUPT20H-215ENST00000478911 ITGA10O75578 1167 aa4.28□□□□□ -1.72
SUPT20H-215ENST00000478911 UBXN7O94888 489 aa4.28□□□□□ -1.72
SUPT20H-215ENST00000478911 CNOT4O95628 575 aaKnown RBP4.28□□□□□ -1.72
SUPT20H-215ENST00000478911 GASTP01350 101 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms