RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	BMPR1A	P36894	532 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	AFM	P43652	599 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	CASP5	P51878	434 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	FAM160A1	Q05DH4	1040 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	MCL1	Q07820	350 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	SNW1	Q13573	536 aa	Known RBP	10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	CUL4B	Q13620	913 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	EPC2	Q52LR7	807 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	NOMO2	Q5JPE7	1267 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	MPZL3	Q6UWV2	235 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	LRRC55	Q6ZSA7	311 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	TMEM192	Q8IY95	271 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	ARNTL2	Q8WYA1	636 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	BLZF1	Q9H2G9	400 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	PRDM12	Q9H4Q4	367 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	CWH43	Q9H720	699 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	MRPL44	Q9H9J2	332 aa	Known RBP	10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	TYW1	Q9NV66	732 aa	Known RBP	10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	HCST	Q9UBK5	93 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	GIT1	Q9Y2X7	761 aa		10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	COL4A4	P53420	1690 aa	Predicted RBP	10.4	□□□□□ -0.74
SFI1-222	ENST00000478887	TCHH	Q07283	1943 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	LAMA2	P24043	3122 aa	Known RBP	10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	CHD9	Q3L8U1	2897 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	HNRNPDL	O14979	420 aa	Known RBP	10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	KLRC4	O43908	158 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	RECQL4	O94761	1208 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	GCNT3	O95395	438 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	RB1	P06400	928 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	MYB	P10242	640 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	LAG3	P18627	525 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	CTNNB1	P35222	781 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	MLH1	P40692	756 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	GRM5	P41594	1212 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	LIG4	P49917	911 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	NOLC1	Q14978	699 aa	Known RBP eCLIP	10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	FAM26F	Q5R3K3	315 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	L1TD1	Q5T7N2	865 aa	Known RBP	10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	SLC39A4	Q6P5W5	647 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	FBXO22	Q8NEZ5	403 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	URGCP	Q8TCY9	931 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	P2RX5	Q93086	422 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	BICD1	Q96G01	975 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	ZBTB45	Q96K62	511 aa	Predicted RBP	10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	CDX2	Q99626	313 aa	Predicted RBP	10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	APOL6	Q9BWW8	343 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	PLVAP	Q9BX97	442 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	CERS4	Q9HA82	394 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	TBC1D13	Q9NVG8	400 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	TBC1D7	Q9P0N9	293 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	MTUS1	Q9ULD2	1270 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	INPP5F	Q9Y2H2	1132 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	PCDHB13	Q9Y5F0	798 aa		10.39	□□□□□ -0.75
SFI1-222	ENST00000478887	RALGAPA2	Q2PPJ7	1873 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	UBE4B	O95155	1302 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	CARNS1	A5YM72	827 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	ARL5C	A6NH57	179 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887		H3BNC9	293 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	EIF3D	O15371	548 aa	Known RBP eCLIP	10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	CLDN3	O15551	220 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	B4GALT3	O60512	393 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	LPXN	O60711	386 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	GADD45B	O75293	160 aa	Predicted RBP	10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	PRR29	P0C7W0	189 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	AKAP5	P24588	427 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	SCNN1G	P51170	649 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	AFF1	P51825	1210 aa	Known RBP	10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	KCNA1	Q09470	495 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	DPYD	Q12882	1025 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	GRIK3	Q13003	919 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	ADGRE1	Q14246	886 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	TPRN	Q4KMQ1	711 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	KANK3	Q6NY19	840 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	STXBP4	Q6ZWJ1	553 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	EPM2AIP1	Q7L775	607 aa	Predicted RBP	10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	CEP120	Q8N960	986 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	COLGALT1	Q8NBJ5	622 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	GLIS3	Q8NEA6	775 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	GSTCD	Q8NEC7	633 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	GDPD5	Q8WTR4	605 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	MYLIP	Q8WY64	445 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	ZFP42	Q96MM3	310 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	TIGD1	Q96MW7	591 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	ZNF558	Q96NG5	402 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	ACCS	Q96QU6	501 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	GAD1	Q99259	594 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	CCDC94	Q9BW85	323 aa	Predicted RBP	10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	HAPLN2	Q9GZV7	340 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	AAAS	Q9NRG9	546 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	SNTG2	Q9NY99	539 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	KANSL3	Q9P2N6	904 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	ANKFY1	Q9P2R3	1169 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	PARP2	Q9UGN5	583 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	EXOC7	Q9UPT5	735 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	STYXL1	Q9Y6J8	313 aa		10.38	□□□□□ -0.75
SFI1-222	ENST00000478887	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.37	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms