RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 ABHD15Q6UXT9 468 aa6.35□□□□□ -1.39
UPF3B-203ENST00000478840 ABI1Q8IZP0 508 aa6.35□□□□□ -1.39
UPF3B-203ENST00000478840 MYRIPQ8NFW9 859 aa6.35□□□□□ -1.39
UPF3B-203ENST00000478840 SLC35A4Q96G79 324 aa6.35□□□□□ -1.39
UPF3B-203ENST00000478840 CLPTM1LQ96KA5 538 aa6.35□□□□□ -1.39
UPF3B-203ENST00000478840 WDR12Q9GZL7 423 aaKnown RBP6.35□□□□□ -1.39
UPF3B-203ENST00000478840 ZMAT3Q9HA38 289 aaKnown RBP6.35□□□□□ -1.39
UPF3B-203ENST00000478840 LMBRD1Q9NUN5 540 aa6.35□□□□□ -1.39
UPF3B-203ENST00000478840 DNAI1Q9UI46 699 aa6.35□□□□□ -1.39
UPF3B-203ENST00000478840 LRRC14BA6NHZ5 514 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 ISM1B1AKI9 464 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 F5H423 210 aaPredicted RBP6.34□□□□□ -1.39
UPF3B-203ENST00000478840 MYO1FO00160 1098 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 EIF5BO60841 1220 aaKnown RBP6.34□□□□□ -1.39
UPF3B-203ENST00000478840 CYP7B1O75881 506 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 HALP42357 657 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 WNT3AP56704 352 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 SESN2P58004 480 aaPredicted RBP6.34□□□□□ -1.39
UPF3B-203ENST00000478840 PLS1Q14651 629 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 CCDC157Q569K6 752 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 PHF19Q5T6S3 580 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 ANO1Q5XXA6 986 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 TRIM68Q6AZZ1 485 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 HEATR3Q7Z4Q2 680 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 LDHDQ86WU2 507 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 TTLL6Q8N841 843 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 KYQ8NBH2 561 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 PIK3C3Q8NEB9 887 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 IFI44Q8TCB0 444 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 POF1BQ8WVV4 589 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 ATXN2LQ8WWM7 1075 aaKnown RBP6.34□□□□□ -1.39
UPF3B-203ENST00000478840 NT5C1BQ96P26 610 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 SYT3Q9BQG1 590 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 C11orf84Q9BUA3 381 aaPredicted RBP6.34□□□□□ -1.39
UPF3B-203ENST00000478840 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.34□□□□□ -1.39
UPF3B-203ENST00000478840 MAF1Q9H063 256 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 STARD7Q9NQZ5 370 aa6.34□□□□□ -1.39
UPF3B-203ENST00000478840 H0Y858 1186 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 TBX3O15119 743 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 PIP5K1CO60331 668 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 FTH1P19P0C7X4 201 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 PFKLP17858 780 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 TNFSF4P23510 183 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 SRSF3P84103 164 aaKnown RBP6.33□□□□□ -1.4
UPF3B-203ENST00000478840 ATP8B2P98198 1209 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 TLE1Q04724 770 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 ZNF543Q08ER8 600 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 KHDC1Q4VXA5 237 aaKnown RBP6.33□□□□□ -1.4
UPF3B-203ENST00000478840 IZUMO3Q5VZ72 239 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 OTOP2Q7RTS6 562 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 ZSWIM9Q86XI8 627 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 MYLK4Q86YV6 388 aaPredicted RBP6.33□□□□□ -1.4
UPF3B-203ENST00000478840 NKAPQ8N5F7 415 aaKnown RBP6.33□□□□□ -1.4
UPF3B-203ENST00000478840 ANKRD42Q8N9B4 389 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 OR7D4Q8NG98 312 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 PNISRQ8TF01 805 aaKnown RBP6.33□□□□□ -1.4
UPF3B-203ENST00000478840 ZNF480Q8WV37 535 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 GFM2Q969S9 779 aaKnown RBP6.33□□□□□ -1.4
UPF3B-203ENST00000478840 MSLNLQ96KJ4 702 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 COLEC11Q9BWP8 271 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 UNKQ9C0B0 810 aaKnown RBP6.33□□□□□ -1.4
UPF3B-203ENST00000478840 CNTD2Q9H8S5 307 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 ARFGAP3Q9NP61 516 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 PNPOQ9NVS9 261 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 TRPS1Q9UHF7 1281 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 MAGEL2Q9UJ55 1249 aa6.33□□□□□ -1.4
UPF3B-203ENST00000478840 H3BUI4 141 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 DDX3XO00571 662 aaKnown RBP eCLIP6.32□□□□□ -1.4
UPF3B-203ENST00000478840 PRAMEF4O60810 478 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 GASTP01350 101 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 AMY1AP04745 511 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 HNRNPLP14866 589 aaKnown RBP eCLIP6.32□□□□□ -1.4
UPF3B-203ENST00000478840 MALP21145 153 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 POLD1P28340 1107 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 ADSLP30566 484 aaPredicted RBP6.32□□□□□ -1.4
UPF3B-203ENST00000478840 GUCY1A2P33402 732 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 CRHR1P34998 444 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 SREBF1P36956 1147 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 ADCY8P40145 1251 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 ETV4P43268 484 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 CDR1P51861 262 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 TOP3AQ13472 1001 aaPredicted RBP6.32□□□□□ -1.4
UPF3B-203ENST00000478840 SNAPC2Q13487 334 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 CLEC14AQ86T13 490 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 NBPF11Q86T75 865 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 SKAP1Q86WV1 359 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 BRI3BPQ8WY22 251 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 WDCPQ9H6R7 721 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 ARMT1Q9H993 441 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 KIAA1586Q9HCI6 787 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 GNL3LQ9NVN8 582 aaKnown RBP6.32□□□□□ -1.4
UPF3B-203ENST00000478840 LUZP4Q9P127 313 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 ABCF2Q9UG63 623 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 MBD1Q9UIS9 605 aaPredicted RBP6.32□□□□□ -1.4
UPF3B-203ENST00000478840 PCDHA3Q9Y5H8 950 aa6.32□□□□□ -1.4
UPF3B-203ENST00000478840 A0A1W2PPL8 197 aa6.31□□□□□ -1.4
UPF3B-203ENST00000478840 NT5C1B-RDH14C9J2C7 533 aa6.31□□□□□ -1.4
UPF3B-203ENST00000478840 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.31□□□□□ -1.4
UPF3B-203ENST00000478840 DAPK3O43293 454 aa6.31□□□□□ -1.4
UPF3B-203ENST00000478840 NBNO60934 754 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms