RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SH3GLB2Q9NR46 395 aa19.18■□□□□ 0.66
VIM-204ENST00000478746 FBXO4Q9UKT5 387 aa19.18■□□□□ 0.66
VIM-204ENST00000478746 SPTLC1O15269 473 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 ERLIN2O94905 339 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 AXLP30530 894 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 CSTF1Q05048 431 aaKnown RBP19.17■□□□□ 0.66
VIM-204ENST00000478746 NCBP1Q09161 790 aaKnown RBP19.17■□□□□ 0.66
VIM-204ENST00000478746 NTRK3Q16288 839 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 SLC44A4Q53GD3 710 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 FGF14Q92915 247 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 ZFP42Q96MM3 310 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 DHX33Q9H6R0 707 aaKnown RBP19.17■□□□□ 0.66
VIM-204ENST00000478746 CDH7Q9ULB5 785 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 HES2Q9Y543 173 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 PPME1Q9Y570 386 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 DOCK6Q96HP0 2047 aa19.17■□□□□ 0.66
VIM-204ENST00000478746 MIA3Q5JRA6 1907 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 FAM170BA6NMN3 283 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 EML1O00423 815 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 RPL17P18621 184 aaKnown RBP19.16■□□□□ 0.66
VIM-204ENST00000478746 RFC5P40937 340 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 ATXN1P54253 815 aaKnown RBP19.16■□□□□ 0.66
VIM-204ENST00000478746 CREMQ03060 361 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 PRKCQQ04759 706 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 UBXN2BQ14CS0 331 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 MLF2Q15773 248 aaPredicted RBP19.16■□□□□ 0.66
VIM-204ENST00000478746 FUT10Q6P4F1 479 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 NOTUMQ6P988 496 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 GRASPQ7Z6J2 395 aaPredicted RBP19.16■□□□□ 0.66
VIM-204ENST00000478746 TCP11Q8WWU5 503 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 SECISBP2LQ93073 1101 aaKnown RBP19.16■□□□□ 0.66
VIM-204ENST00000478746 APOL6Q9BWW8 343 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 SLKQ9H2G2 1235 aaPredicted RBP19.16■□□□□ 0.66
VIM-204ENST00000478746 GIT1Q9Y2X7 761 aa19.16■□□□□ 0.66
VIM-204ENST00000478746 MTF2Q9Y483 593 aaPredicted RBP19.16■□□□□ 0.66
VIM-204ENST00000478746 SPTBN2O15020 2390 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 P4HBP07237 508 aaKnown RBP19.15■□□□□ 0.66
VIM-204ENST00000478746 IFNAR1P17181 557 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 PCBP1Q15365 356 aaKnown RBP eCLIP19.15■□□□□ 0.66
VIM-204ENST00000478746 MTSS1LQ765P7 747 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 FERMT3Q86UX7 667 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 CCDC51Q96ER9 411 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 CPB2Q96IY4 423 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 MBOAT7Q96N66 472 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 DDX23Q9BUQ8 820 aaKnown RBP19.15■□□□□ 0.66
VIM-204ENST00000478746 OSBPL6Q9BZF3 934 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 CSRNP2Q9H175 543 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 BMP2KQ9NSY1 1161 aaPredicted RBP19.15■□□□□ 0.66
VIM-204ENST00000478746 DDX25Q9UHL0 483 aaKnown RBP19.15■□□□□ 0.66
VIM-204ENST00000478746 ADAM28Q9UKQ2 775 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 PCDHA4Q9UN74 947 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 PCDHGA2Q9Y5H1 932 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 TDRD15B5MCY1 1934 aaKnown RBP19.15■□□□□ 0.66
VIM-204ENST00000478746 NID2Q14112 1375 aa19.15■□□□□ 0.66
VIM-204ENST00000478746 TSPAN1O60635 241 aa19.14■□□□□ 0.65
VIM-204ENST00000478746 TADA2AO75478 443 aa19.14■□□□□ 0.65
VIM-204ENST00000478746 NTHL1P78549 312 aa19.14■□□□□ 0.65
VIM-204ENST00000478746 MOXD1Q6UVY6 613 aa19.14■□□□□ 0.65
VIM-204ENST00000478746 OTUD6AQ7L8S5 288 aa19.14■□□□□ 0.65
VIM-204ENST00000478746 HACE1Q8IYU2 909 aa19.14■□□□□ 0.65
VIM-204ENST00000478746 TRIM6Q9C030 488 aaPredicted RBP19.14■□□□□ 0.65
VIM-204ENST00000478746 MYH15Q9Y2K3 1946 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 ACACBO00763 2458 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 PRR5-ARHGAP8B1AHC4 643 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 HNRNPA1P09651 372 aaKnown RBP eCLIP19.13■□□□□ 0.65
VIM-204ENST00000478746 MAGEA9P43362 315 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 PTENP60484 403 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 ARHGAP8P85298 464 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 PFKPQ01813 784 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 PPP2R5CQ13362 524 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 ZBTB41Q5SVQ8 909 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 PRSS55Q6UWB4 352 aaPredicted RBP19.13■□□□□ 0.65
VIM-204ENST00000478746 RSPO2Q6UXX9 243 aaPredicted RBP19.13■□□□□ 0.65
VIM-204ENST00000478746 BLIDQ8IZY5 108 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 RABGGTAQ92696 567 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 FGF13Q92913 245 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 ZSCAN32Q9NX65 697 aa19.13■□□□□ 0.65
VIM-204ENST00000478746 WRAP73Q9P2S5 460 aaPredicted RBP19.13■□□□□ 0.65
VIM-204ENST00000478746 KMT2BQ9UMN6 2715 aaPredicted RBP19.13■□□□□ 0.65
VIM-204ENST00000478746 INO80B-WBP1J3KQ70 363 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 CD72P21854 359 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 AKAP5P24588 427 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 YWHABP31946 246 aaKnown RBP19.12■□□□□ 0.65
VIM-204ENST00000478746 CCT2P78371 535 aaKnown RBP19.12■□□□□ 0.65
VIM-204ENST00000478746 MXD4Q14582 209 aaPredicted RBP19.12■□□□□ 0.65
VIM-204ENST00000478746 EMC2Q15006 297 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 PPM1LQ5SGD2 360 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 LIN9Q5TKA1 542 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 BLOC1S2Q6QNY1 142 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 C4orf19Q8IY42 314 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 ZBTB44Q8NCP5 570 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 GSTCDQ8NEC7 633 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 FAM20AQ96MK3 541 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 JAKMIP1Q96N16 626 aaKnown RBP19.12■□□□□ 0.65
VIM-204ENST00000478746 NCOA5Q9HCD5 579 aaKnown RBP19.12■□□□□ 0.65
VIM-204ENST00000478746 LTB4R2Q9NPC1 389 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 FBXW11Q9UKB1 542 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 CDV3Q9UKY7 258 aaKnown RBP19.12■□□□□ 0.65
VIM-204ENST00000478746 POLIQ9UNA4 740 aa19.12■□□□□ 0.65
VIM-204ENST00000478746 M0R2N6 131 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms